Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 AC015689.2-201ENST00000528172 1738 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
COL8A1P27658 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL8A1P27658 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.47□□□□□ -1.37
COL8A1P27658 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL8A1P27658 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
COL8A1P27658 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC6.47□□□□□ -1.37
COL8A1P27658 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL8A1P27658 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC6.47□□□□□ -1.37
COL8A1P27658 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.47□□□□□ -1.37
COL8A1P27658 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL8A1P27658 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC6.47□□□□□ -1.37
COL8A1P27658 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
COL8A1P27658 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.47□□□□□ -1.37
COL8A1P27658 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC6.47□□□□□ -1.37
COL8A1P27658 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL8A1P27658 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
COL8A1P27658 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL8A1P27658 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL8A1P27658 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
COL8A1P27658 SNORD35A-201ENST00000363389 86 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 RN7SKP36-201ENST00000363997 312 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 SNORD94-201ENST00000386037 137 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 U8.14-201ENST00000390843 143 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 U3.23-201ENST00000391132 200 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 RNU6ATAC23P-201ENST00000408448 123 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 MIR1275-201ENST00000408770 80 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 RPS12P24-201ENST00000412619 387 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 AC016769.2-201ENST00000414815 475 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 LINC01347-201ENST00000417964 355 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 RAD23BP1-201ENST00000421404 1227 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC6.47□□□□□ -1.37
COL8A1P27658 NIPA2P1-201ENST00000426223 976 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 AL353898.1-201ENST00000444055 238 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 AL392103.1-201ENST00000447000 198 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 CTSLP6-201ENST00000458273 1002 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 AC015524.1-201ENST00000491585 472 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 AC112184.1-201ENST00000505179 312 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC6.47□□□□□ -1.37
COL8A1P27658 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.47□□□□□ -1.37
COL8A1P27658 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.47□□□□□ -1.37
COL8A1P27658 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC6.47□□□□□ -1.37
COL8A1P27658 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL8A1P27658 AC007375.1-201ENST00000554513 578 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.47□□□□□ -1.37
COL8A1P27658 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.47□□□□□ -1.37
COL8A1P27658 NDUFB9P1-201ENST00000604683 510 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 AC021646.1-201ENST00000605469 484 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 AL451054.1-201ENST00000621770 772 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.47□□□□□ -1.37
COL8A1P27658 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.47□□□□□ -1.37
COL8A1P27658 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
COL8A1P27658 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL8A1P27658 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL8A1P27658 ARHGAP42P5-201ENST00000548856 2936 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL8A1P27658 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL8A1P27658 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
COL8A1P27658 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL8A1P27658 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC6.47□□□□□ -1.37
COL8A1P27658 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL8A1P27658 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL8A1P27658 PRNCR1-201ENST00000635449 12727 ntBASIC6.47□□□□□ -1.37
COL8A1P27658 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.47□□□□□ -1.37
COL8A1P27658 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL8A1P27658 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
COL8A1P27658 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL8A1P27658 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
COL8A1P27658 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL8A1P27658 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL8A1P27658 SEC63P2-201ENST00000503863 1939 ntBASIC6.46□□□□□ -1.37
COL8A1P27658 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL8A1P27658 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL8A1P27658 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COL8A1P27658 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.37
COL8A1P27658 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL8A1P27658 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL8A1P27658 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COL8A1P27658 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
COL8A1P27658 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL8A1P27658 Y_RNA.135-201ENST00000363439 95 ntBASIC6.46□□□□□ -1.38
COL8A1P27658 Y_RNA.159-201ENST00000363674 87 ntBASIC6.46□□□□□ -1.38
COL8A1P27658 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.46□□□□□ -1.38
COL8A1P27658 Y_RNA.557-201ENST00000384680 107 ntBASIC6.46□□□□□ -1.38
COL8A1P27658 MIR99A-201ENST00000384906 81 ntBASIC6.46□□□□□ -1.38
COL8A1P27658 RNY4P36-201ENST00000391116 96 ntBASIC6.46□□□□□ -1.38
COL8A1P27658 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.46□□□□□ -1.38
COL8A1P27658 RNU6-1068P-201ENST00000410958 103 ntBASIC6.46□□□□□ -1.38
COL8A1P27658 RNA5SP115-201ENST00000411160 107 ntBASIC6.46□□□□□ -1.38
COL8A1P27658 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.46□□□□□ -1.38
COL8A1P27658 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.46□□□□□ -1.38
COL8A1P27658 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC6.46□□□□□ -1.38
COL8A1P27658 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL8A1P27658 AC115283.1-201ENST00000427353 400 ntBASIC6.46□□□□□ -1.38
COL8A1P27658 AL049734.2-201ENST00000441066 616 ntBASIC6.46□□□□□ -1.38
COL8A1P27658 AC079781.1-201ENST00000441505 394 ntBASIC6.46□□□□□ -1.38
COL8A1P27658 OR51P1P-201ENST00000447547 942 ntBASIC6.46□□□□□ -1.38
COL8A1P27658 AC002075.1-201ENST00000457396 676 ntBASIC6.46□□□□□ -1.38
COL8A1P27658 RNU6-329P-201ENST00000459618 107 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms