Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
RFX1P22670 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
RFX1P22670 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
RFX1P22670 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.52□□□□□ -1.21
RFX1P22670 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RFX1P22670 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFX1P22670 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
RFX1P22670 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.52□□□□□ -1.21
RFX1P22670 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.52□□□□□ -1.21
RFX1P22670 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.52□□□□□ -1.21
RFX1P22670 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFX1P22670 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RFX1P22670 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC7.52□□□□□ -1.21
RFX1P22670 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.52□□□□□ -1.21
RFX1P22670 AC010132.4-201ENST00000569883 1368 ntBASIC7.52□□□□□ -1.21
RFX1P22670 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RFX1P22670 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RFX1P22670 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RFX1P22670 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RFX1P22670 RNU6-272P-201ENST00000411028 104 ntBASIC7.52□□□□□ -1.21
RFX1P22670 RNA5SP280-201ENST00000411230 115 ntBASIC7.52□□□□□ -1.21
RFX1P22670 FCF1P2-201ENST00000415284 583 ntBASIC7.52□□□□□ -1.21
RFX1P22670 AC092634.6-201ENST00000418558 192 ntBASIC7.52□□□□□ -1.21
RFX1P22670 AC009237.2-201ENST00000421358 284 ntBASIC7.52□□□□□ -1.21
RFX1P22670 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.52□□□□□ -1.21
RFX1P22670 AL831737.1-201ENST00000441288 271 ntBASIC7.52□□□□□ -1.21
RFX1P22670 BX005266.3-201ENST00000443013 1075 ntBASIC7.52□□□□□ -1.21
RFX1P22670 AL031681.1-201ENST00000443304 400 ntBASIC7.52□□□□□ -1.21
RFX1P22670 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC7.52□□□□□ -1.21
RFX1P22670 AL672138.1-201ENST00000450604 1015 ntBASIC7.52□□□□□ -1.21
RFX1P22670 AC098824.1-201ENST00000453565 980 ntBASIC7.52□□□□□ -1.21
RFX1P22670 AL591122.1-201ENST00000487348 492 ntBASIC7.52□□□□□ -1.21
RFX1P22670 PRDX4P1-201ENST00000507189 574 ntBASIC7.52□□□□□ -1.21
RFX1P22670 ST13P12-201ENST00000508958 1094 ntBASIC7.52□□□□□ -1.21
RFX1P22670 AC108471.1-201ENST00000513977 287 ntBASIC7.52□□□□□ -1.21
RFX1P22670 SNORA48.10-201ENST00000516965 160 ntBASIC7.52□□□□□ -1.21
RFX1P22670 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.52□□□□□ -1.21
RFX1P22670 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.52□□□□□ -1.21
RFX1P22670 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.52□□□□□ -1.21
RFX1P22670 AP002373.2-201ENST00000541631 1060 ntBASIC7.52□□□□□ -1.21
RFX1P22670 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.52□□□□□ -1.21
RFX1P22670 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC7.52□□□□□ -1.21
RFX1P22670 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.52□□□□□ -1.21
RFX1P22670 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC7.52□□□□□ -1.21
RFX1P22670 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.52□□□□□ -1.21
RFX1P22670 AC092032.1-201ENST00000603090 165 ntBASIC7.52□□□□□ -1.21
RFX1P22670 AL354760.1-201ENST00000608357 643 ntBASIC7.52□□□□□ -1.21
RFX1P22670 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.52□□□□□ -1.21
RFX1P22670 AC090970.3-201ENST00000612566 866 ntBASIC7.52□□□□□ -1.21
RFX1P22670 AC211486.4-201ENST00000621495 113 ntBASIC7.52□□□□□ -1.21
RFX1P22670 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC7.52□□□□□ -1.21
RFX1P22670 AC011471.4-201ENST00000638271 216 ntBASIC7.52□□□□□ -1.21
RFX1P22670 OR5H6-203ENST00000642105 978 ntBASIC7.52□□□□□ -1.21
RFX1P22670 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.52□□□□□ -1.21
RFX1P22670 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.52□□□□□ -1.21
RFX1P22670 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFX1P22670 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFX1P22670 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFX1P22670 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFX1P22670 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFX1P22670 AC119674.1-204ENST00000641348 1343 ntBASIC7.52□□□□□ -1.21
RFX1P22670 TMEM75-201ENST00000624314 2165 ntBASIC7.52□□□□□ -1.21
RFX1P22670 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.51□□□□□ -1.21
RFX1P22670 TMCC1P1-201ENST00000518897 1980 ntBASIC7.51□□□□□ -1.21
RFX1P22670 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
RFX1P22670 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
RFX1P22670 AC092111.1-201ENST00000618256 3358 ntBASIC7.51□□□□□ -1.21
RFX1P22670 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RFX1P22670 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RFX1P22670 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RFX1P22670 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
RFX1P22670 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
RFX1P22670 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.51□□□□□ -1.21
RFX1P22670 ZNF37BP-203ENST00000452306 1352 ntBASIC7.51□□□□□ -1.21
RFX1P22670 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RFX1P22670 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RFX1P22670 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RFX1P22670 RNU6-115P-201ENST00000364310 107 ntBASIC7.51□□□□□ -1.21
RFX1P22670 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
RFX1P22670 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RFX1P22670 SNORD94-201ENST00000386037 137 ntBASIC7.51□□□□□ -1.21
RFX1P22670 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
RFX1P22670 AL359715.1-201ENST00000404330 555 ntBASIC7.51□□□□□ -1.21
RFX1P22670 RPS3AP24-201ENST00000407896 734 ntBASIC7.51□□□□□ -1.21
RFX1P22670 RNU2-22P-201ENST00000411266 212 ntBASIC7.51□□□□□ -1.21
RFX1P22670 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.51□□□□□ -1.21
RFX1P22670 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC7.51□□□□□ -1.21
RFX1P22670 Z97055.1-201ENST00000419730 712 ntBASIC7.51□□□□□ -1.21
RFX1P22670 AL953862.1-201ENST00000423016 168 ntBASIC7.51□□□□□ -1.21
RFX1P22670 OR8F1P-201ENST00000425243 930 ntBASIC7.51□□□□□ -1.21
RFX1P22670 CHCHD3P1-201ENST00000425516 676 ntBASIC7.51□□□□□ -1.21
RFX1P22670 AC104843.2-201ENST00000427666 297 ntBASIC7.51□□□□□ -1.21
RFX1P22670 CNOT7P2-201ENST00000441051 832 ntBASIC7.51□□□□□ -1.21
RFX1P22670 WASF1P1-201ENST00000447560 1131 ntBASIC7.51□□□□□ -1.21
RFX1P22670 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC7.51□□□□□ -1.21
RFX1P22670 RPL31P58-201ENST00000469001 379 ntBASIC7.51□□□□□ -1.21
RFX1P22670 FCF1P3-201ENST00000496394 590 ntBASIC7.51□□□□□ -1.21
RFX1P22670 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC7.51□□□□□ -1.21
RFX1P22670 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.51□□□□□ -1.21
RFX1P22670 AC021220.1-201ENST00000507445 630 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms