Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CDH12P3-201ENST00000517935 295 ntBASIC4.45□□□□□ -1.7
FREM3P0C091 CDH12P1-201ENST00000518435 295 ntBASIC4.45□□□□□ -1.7
FREM3P0C091 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.45□□□□□ -1.7
FREM3P0C091 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.45□□□□□ -1.7
FREM3P0C091 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.45□□□□□ -1.7
FREM3P0C091 MIR5699-201ENST00000578903 90 ntBASIC4.45□□□□□ -1.7
FREM3P0C091 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
FREM3P0C091 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FREM3P0C091 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.45□□□□□ -1.7
FREM3P0C091 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FREM3P0C091 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
FREM3P0C091 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FREM3P0C091 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FREM3P0C091 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
FREM3P0C091 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
FREM3P0C091 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FREM3P0C091 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
FREM3P0C091 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FREM3P0C091 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
FREM3P0C091 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
FREM3P0C091 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
FREM3P0C091 ARL4AP5-201ENST00000404372 599 ntBASIC4.45□□□□□ -1.7
FREM3P0C091 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.45□□□□□ -1.7
FREM3P0C091 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FREM3P0C091 CR383656.1-201ENST00000484916 377 ntBASIC4.45□□□□□ -1.7
FREM3P0C091 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FREM3P0C091 AC073358.1-201ENST00000505671 684 ntBASIC4.45□□□□□ -1.7
FREM3P0C091 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.45□□□□□ -1.7
FREM3P0C091 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.45□□□□□ -1.7
FREM3P0C091 AC008033.2-201ENST00000542626 177 ntBASIC4.45□□□□□ -1.7
FREM3P0C091 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.45□□□□□ -1.7
FREM3P0C091 MIR6758-201ENST00000620653 63 ntBASIC4.45□□□□□ -1.7
FREM3P0C091 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
FREM3P0C091 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.44□□□□□ -1.7
FREM3P0C091 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
FREM3P0C091 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.44□□□□□ -1.7
FREM3P0C091 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FREM3P0C091 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FREM3P0C091 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FREM3P0C091 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FREM3P0C091 AL357515.1-201ENST00000402967 542 ntBASIC4.44□□□□□ -1.7
FREM3P0C091 AC019050.1-201ENST00000418508 492 ntBASIC4.44□□□□□ -1.7
FREM3P0C091 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.44□□□□□ -1.7
FREM3P0C091 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.44□□□□□ -1.7
FREM3P0C091 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.44□□□□□ -1.7
FREM3P0C091 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.44□□□□□ -1.7
FREM3P0C091 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.44□□□□□ -1.7
FREM3P0C091 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.44□□□□□ -1.7
FREM3P0C091 DEFB109A-201ENST00000482450 265 ntBASIC4.44□□□□□ -1.7
FREM3P0C091 AC090142.2-201ENST00000483263 416 ntBASIC4.44□□□□□ -1.7
FREM3P0C091 RN7SKP276-201ENST00000516242 268 ntBASIC4.44□□□□□ -1.7
FREM3P0C091 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.44□□□□□ -1.7
FREM3P0C091 AC018552.1-201ENST00000562099 811 ntBASIC4.44□□□□□ -1.7
FREM3P0C091 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.44□□□□□ -1.7
FREM3P0C091 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.44□□□□□ -1.7
FREM3P0C091 AC010424.2-201ENST00000607594 443 ntBASIC4.44□□□□□ -1.7
FREM3P0C091 MIR6780A-201ENST00000615089 68 ntBASIC4.44□□□□□ -1.7
FREM3P0C091 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.44□□□□□ -1.7
FREM3P0C091 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
FREM3P0C091 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FREM3P0C091 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
FREM3P0C091 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.44□□□□□ -1.7
FREM3P0C091 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FREM3P0C091 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FREM3P0C091 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FREM3P0C091 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.44□□□□□ -1.7
FREM3P0C091 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FREM3P0C091 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.43□□□□□ -1.7
FREM3P0C091 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
FREM3P0C091 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
FREM3P0C091 SNORA70.10-201ENST00000384515 134 ntBASIC4.43□□□□□ -1.7
FREM3P0C091 RPL37P18-201ENST00000411602 243 ntBASIC4.43□□□□□ -1.7
FREM3P0C091 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.43□□□□□ -1.7
FREM3P0C091 TXNP2-201ENST00000443918 295 ntBASIC4.43□□□□□ -1.7
FREM3P0C091 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FREM3P0C091 AL157385.1-201ENST00000446973 268 ntBASIC4.43□□□□□ -1.7
FREM3P0C091 AC020779.1-201ENST00000478757 796 ntBASIC4.43□□□□□ -1.7
FREM3P0C091 NIFKP7-201ENST00000503365 834 ntBASIC4.43□□□□□ -1.7
FREM3P0C091 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.43□□□□□ -1.7
FREM3P0C091 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.43□□□□□ -1.7
FREM3P0C091 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.43□□□□□ -1.7
FREM3P0C091 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.43□□□□□ -1.7
FREM3P0C091 CYCSP40-201ENST00000575927 294 ntBASIC4.43□□□□□ -1.7
FREM3P0C091 AC104785.1-201ENST00000603220 588 ntBASIC4.43□□□□□ -1.7
FREM3P0C091 AC008745.1-201ENST00000604064 271 ntBASIC4.43□□□□□ -1.7
FREM3P0C091 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.43□□□□□ -1.7
FREM3P0C091 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FREM3P0C091 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FREM3P0C091 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FREM3P0C091 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FREM3P0C091 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.43□□□□□ -1.7
FREM3P0C091 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
FREM3P0C091 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
FREM3P0C091 AC100778.3-201ENST00000580060 1750 ntBASIC4.43□□□□□ -1.7
FREM3P0C091 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.43□□□□□ -1.7
FREM3P0C091 MFSD8-216ENST00000641147 4009 ntBASIC4.43□□□□□ -1.7
FREM3P0C091 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FREM3P0C091 CYB5AP4-201ENST00000396692 399 ntBASIC4.43□□□□□ -1.7
FREM3P0C091 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.43□□□□□ -1.7
FREM3P0C091 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms