Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TPM1P09493 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TPM1P09493 RN7SKP124-201ENST00000364730 341 ntBASIC5.48□□□□□ -1.53
TPM1P09493 AL672167.2-201ENST00000377164 879 ntBASIC5.48□□□□□ -1.53
TPM1P09493 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TPM1P09493 SNORA67-201ENST00000384423 137 ntBASIC5.48□□□□□ -1.53
TPM1P09493 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
TPM1P09493 MIR1182-201ENST00000408363 97 ntBASIC5.48□□□□□ -1.53
TPM1P09493 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.48□□□□□ -1.53
TPM1P09493 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.48□□□□□ -1.53
TPM1P09493 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.48□□□□□ -1.53
TPM1P09493 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.48□□□□□ -1.53
TPM1P09493 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.48□□□□□ -1.53
TPM1P09493 RPL7P6-201ENST00000480903 738 ntBASIC5.48□□□□□ -1.53
TPM1P09493 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.48□□□□□ -1.53
TPM1P09493 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.48□□□□□ -1.53
TPM1P09493 AC021146.3-201ENST00000511911 260 ntBASIC5.48□□□□□ -1.53
TPM1P09493 SNORD46.2-201ENST00000516021 102 ntBASIC5.48□□□□□ -1.53
TPM1P09493 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
TPM1P09493 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.48□□□□□ -1.53
TPM1P09493 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TPM1P09493 AC009779.8-202ENST00000607990 932 ntBASIC5.48□□□□□ -1.53
TPM1P09493 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TPM1P09493 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.48□□□□□ -1.53
TPM1P09493 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
TPM1P09493 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TPM1P09493 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.48□□□□□ -1.53
TPM1P09493 SSXP3-201ENST00000442971 1300 ntBASIC5.48□□□□□ -1.53
TPM1P09493 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TPM1P09493 MTCO1P22-201ENST00000604619 1360 ntBASIC5.47□□□□□ -1.53
TPM1P09493 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TPM1P09493 RNA5SP510-201ENST00000364697 99 ntBASIC5.47□□□□□ -1.53
TPM1P09493 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.47□□□□□ -1.53
TPM1P09493 LRRC37BP1-201ENST00000398851 714 ntBASIC5.47□□□□□ -1.53
TPM1P09493 VN1R12P-201ENST00000403778 876 ntBASIC5.47□□□□□ -1.53
TPM1P09493 AC009237.10-201ENST00000414112 510 ntBASIC5.47□□□□□ -1.53
TPM1P09493 QRSL1P2-201ENST00000418582 964 ntBASIC5.47□□□□□ -1.53
TPM1P09493 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
TPM1P09493 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.47□□□□□ -1.53
TPM1P09493 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.47□□□□□ -1.53
TPM1P09493 AL691482.1-201ENST00000453255 87 ntBASIC5.47□□□□□ -1.53
TPM1P09493 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.47□□□□□ -1.53
TPM1P09493 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.47□□□□□ -1.53
TPM1P09493 AC007998.1-201ENST00000474156 672 ntBASIC5.47□□□□□ -1.53
TPM1P09493 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
TPM1P09493 RPL37P23-201ENST00000492641 294 ntBASIC5.47□□□□□ -1.53
TPM1P09493 PSMA2P2-201ENST00000504319 686 ntBASIC5.47□□□□□ -1.53
TPM1P09493 RNU6-943P-201ENST00000516960 98 ntBASIC5.47□□□□□ -1.53
TPM1P09493 AC134698.5-201ENST00000519444 336 ntBASIC5.47□□□□□ -1.53
TPM1P09493 AC027544.3-201ENST00000535082 757 ntBASIC5.47□□□□□ -1.53
TPM1P09493 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.47□□□□□ -1.53
TPM1P09493 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.47□□□□□ -1.53
TPM1P09493 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.47□□□□□ -1.53
TPM1P09493 AC084759.1-201ENST00000561168 290 ntBASIC5.47□□□□□ -1.53
TPM1P09493 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.47□□□□□ -1.53
TPM1P09493 SUGT1P3-202ENST00000604259 383 ntBASIC5.47□□□□□ -1.53
TPM1P09493 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.47□□□□□ -1.53
TPM1P09493 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.47□□□□□ -1.53
TPM1P09493 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TPM1P09493 LINC01109-201ENST00000603837 3081 ntBASIC5.46□□□□□ -1.53
TPM1P09493 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TPM1P09493 MIPEPP2-201ENST00000422560 1819 ntBASIC5.46□□□□□ -1.53
TPM1P09493 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.46□□□□□ -1.53
TPM1P09493 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TPM1P09493 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TPM1P09493 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TPM1P09493 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
TPM1P09493 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TPM1P09493 RNU6-1320P-201ENST00000390838 107 ntBASIC5.46□□□□□ -1.54
TPM1P09493 RNU6-1269P-201ENST00000391139 107 ntBASIC5.46□□□□□ -1.54
TPM1P09493 AL512422.1-201ENST00000407033 553 ntBASIC5.46□□□□□ -1.54
TPM1P09493 AL390774.1-201ENST00000411924 246 ntBASIC5.46□□□□□ -1.54
TPM1P09493 CYCSP10-201ENST00000417973 294 ntBASIC5.46□□□□□ -1.54
TPM1P09493 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.46□□□□□ -1.54
TPM1P09493 E2F6P2-201ENST00000420708 748 ntBASIC5.46□□□□□ -1.54
TPM1P09493 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.46□□□□□ -1.54
TPM1P09493 EI24P4-201ENST00000423683 1078 ntBASIC5.46□□□□□ -1.54
TPM1P09493 AC106901.1-201ENST00000425086 698 ntBASIC5.46□□□□□ -1.54
TPM1P09493 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.46□□□□□ -1.54
TPM1P09493 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.46□□□□□ -1.54
TPM1P09493 AC012075.1-201ENST00000436549 580 ntBASIC5.46□□□□□ -1.54
TPM1P09493 AC073052.1-201ENST00000440417 714 ntBASIC5.46□□□□□ -1.54
TPM1P09493 OTX2P1-201ENST00000450956 354 ntBASIC5.46□□□□□ -1.54
TPM1P09493 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.46□□□□□ -1.54
TPM1P09493 YWHAEP1-201ENST00000453697 763 ntBASIC5.46□□□□□ -1.54
TPM1P09493 RNU6-599P-201ENST00000459383 107 ntBASIC5.46□□□□□ -1.54
TPM1P09493 RNU6-1193P-201ENST00000459461 107 ntBASIC5.46□□□□□ -1.54
TPM1P09493 RPL35AP19-201ENST00000469425 329 ntBASIC5.46□□□□□ -1.54
TPM1P09493 RN7SL649P-201ENST00000496974 275 ntBASIC5.46□□□□□ -1.54
TPM1P09493 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.46□□□□□ -1.54
TPM1P09493 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.46□□□□□ -1.54
TPM1P09493 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.46□□□□□ -1.54
TPM1P09493 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.46□□□□□ -1.54
TPM1P09493 MIR4675-201ENST00000577898 77 ntBASIC5.46□□□□□ -1.54
TPM1P09493 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.46□□□□□ -1.54
TPM1P09493 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.46□□□□□ -1.54
TPM1P09493 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.46□□□□□ -1.54
TPM1P09493 AC069307.1-201ENST00000602820 447 ntBASIC5.46□□□□□ -1.54
TPM1P09493 AC087783.2-201ENST00000605070 562 ntBASIC5.46□□□□□ -1.54
TPM1P09493 AP005432.2-201ENST00000608162 586 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms