Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 Z97832.1-201ENST00000402490 328 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 PPIAP9-201ENST00000403866 498 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 CDY14P-201ENST00000431260 1014 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.58□□□□□ -1.68
SPTA1P02549 CDY12P-201ENST00000440679 1015 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 CDY13P-201ENST00000445813 1015 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 CDY23P-201ENST00000451661 1014 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.58□□□□□ -1.68
SPTA1P02549 HMGB1P4-201ENST00000455362 567 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC4.58□□□□□ -1.68
SPTA1P02549 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.58□□□□□ -1.68
SPTA1P02549 AC022360.1-201ENST00000521058 340 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.58□□□□□ -1.68
SPTA1P02549 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.58□□□□□ -1.68
SPTA1P02549 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.58□□□□□ -1.68
SPTA1P02549 AC098935.2-201ENST00000604222 466 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SPTA1P02549 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SPTA1P02549 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC4.58□□□□□ -1.68
SPTA1P02549 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SPTA1P02549 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SPTA1P02549 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SPTA1P02549 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SPTA1P02549 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SPTA1P02549 AC120338.1-201ENST00000625074 1541 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.58□□□□□ -1.68
SPTA1P02549 RNA5SP191-201ENST00000362585 102 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SPTA1P02549 RPL12P43-201ENST00000420608 499 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.58□□□□□ -1.68
SPTA1P02549 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.58□□□□□ -1.68
SPTA1P02549 MRPL35P2-201ENST00000448009 511 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 OR52J1P-201ENST00000450596 932 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.58□□□□□ -1.68
SPTA1P02549 AC058823.1-201ENST00000485315 474 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 AC012339.2-201ENST00000523996 453 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.58□□□□□ -1.68
SPTA1P02549 AC022916.3-201ENST00000592961 742 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.58□□□□□ -1.68
SPTA1P02549 AC022146.1-201ENST00000595307 847 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 AC008814.1-201ENST00000603797 406 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.58□□□□□ -1.68
SPTA1P02549 AP003400.2-201ENST00000624036 666 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SPTA1P02549 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SPTA1P02549 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SPTA1P02549 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SPTA1P02549 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SPTA1P02549 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC4.58□□□□□ -1.68
SPTA1P02549 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SPTA1P02549 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SPTA1P02549 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SPTA1P02549 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SPTA1P02549 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.57□□□□□ -1.68
SPTA1P02549 GTF2IP5-201ENST00000414608 731 ntBASIC4.57□□□□□ -1.68
SPTA1P02549 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.57□□□□□ -1.68
SPTA1P02549 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.57□□□□□ -1.68
SPTA1P02549 RPL12P20-201ENST00000475538 479 ntBASIC4.57□□□□□ -1.68
SPTA1P02549 SCARNA22-201ENST00000503991 125 ntBASIC4.57□□□□□ -1.68
SPTA1P02549 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.57□□□□□ -1.68
SPTA1P02549 AC026726.1-201ENST00000512859 601 ntBASIC4.57□□□□□ -1.68
SPTA1P02549 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SPTA1P02549 AC027807.1-201ENST00000559921 996 ntBASIC4.57□□□□□ -1.68
SPTA1P02549 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC4.57□□□□□ -1.68
SPTA1P02549 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SPTA1P02549 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SPTA1P02549 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SPTA1P02549 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SPTA1P02549 AC034229.2-201ENST00000566945 2508 ntBASIC4.57□□□□□ -1.68
SPTA1P02549 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SPTA1P02549 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SPTA1P02549 RNA5SP251-201ENST00000410614 137 ntBASIC4.57□□□□□ -1.68
SPTA1P02549 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.57□□□□□ -1.68
SPTA1P02549 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.57□□□□□ -1.68
SPTA1P02549 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.57□□□□□ -1.68
SPTA1P02549 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.57□□□□□ -1.68
SPTA1P02549 RPS3AP12-201ENST00000443616 753 ntBASIC4.57□□□□□ -1.68
SPTA1P02549 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.57□□□□□ -1.68
SPTA1P02549 AC091959.2-201ENST00000477363 321 ntBASIC4.57□□□□□ -1.68
SPTA1P02549 RPS24P16-201ENST00000497294 392 ntBASIC4.57□□□□□ -1.68
SPTA1P02549 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.57□□□□□ -1.68
SPTA1P02549 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.57□□□□□ -1.68
SPTA1P02549 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.57□□□□□ -1.68
SPTA1P02549 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.57□□□□□ -1.68
SPTA1P02549 AP005432.2-201ENST00000608162 586 ntBASIC4.57□□□□□ -1.68
SPTA1P02549 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.57□□□□□ -1.68
SPTA1P02549 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SPTA1P02549 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.57□□□□□ -1.68
SPTA1P02549 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.57□□□□□ -1.68
SPTA1P02549 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SPTA1P02549 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SPTA1P02549 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SPTA1P02549 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SPTA1P02549 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SPTA1P02549 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
SPTA1P02549 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SPTA1P02549 RSU1P3-201ENST00000412878 835 ntBASIC4.56□□□□□ -1.68
SPTA1P02549 RPL23AP24-201ENST00000458203 385 ntBASIC4.56□□□□□ -1.68
SPTA1P02549 RN7SL244P-201ENST00000493405 297 ntBASIC4.56□□□□□ -1.68
SPTA1P02549 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms