Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC073429.2-201ENST00000569694 1444 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AL359715.3-201ENST00000569267 2123 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AL603750.1-201ENST00000624216 1717 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 U3.2-201ENST00000362981 210 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 RNU4-7P-201ENST00000364758 141 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 MT-TP-201ENST00000387461 68 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 MIR765-201ENST00000390226 114 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AC104297.1-201ENST00000393779 870 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 MIR937-201ENST00000401271 86 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AC019070.1-201ENST00000415008 1024 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 CEACAMP7-201ENST00000444105 496 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 RN7SL329P-201ENST00000467740 299 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 RPL7AP6-201ENST00000477943 801 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AC015864.1-201ENST00000496512 544 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 MTCO1P31-201ENST00000506355 492 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AC093770.1-201ENST00000511559 571 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AP004607.2-201ENST00000533949 322 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AC005341.1-201ENST00000571086 708 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AC069307.1-201ENST00000602820 447 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 MIR6133-201ENST00000617057 108 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AC073869.8-201ENST00000641806 335 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 SMG1P7-201ENST00000565246 2704 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 AP000473.2-201ENST00000602659 1537 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 CASC19-281ENST00000642118 1554 ntBASIC4.87□□□□□ -1.63
NPIPA3F8WFD2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 HSPA8P15-201ENST00000401676 786 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 OR4K12P-201ENST00000406538 961 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 DUTP5-201ENST00000406790 469 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 UBE2V1P15-201ENST00000407776 448 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 SNORA79B-201ENST00000410557 148 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AL590806.1-201ENST00000415818 853 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AC093655.2-201ENST00000425735 631 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 RPS26P4-201ENST00000431743 355 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 MTND4P15-201ENST00000437913 1033 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 RPS4XP12-201ENST00000461747 709 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AC084373.1-201ENST00000603311 235 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AC087763.1-201ENST00000603391 286 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AP004372.1-201ENST00000604842 844 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AC009163.6-201ENST00000612367 342 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 CR589904.2-201ENST00000612533 440 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms