Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.59□□□□□ -1.35
CTDP1Q9Y5B0 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
CTDP1Q9Y5B0 AC003973.3-201ENST00000624863 2822 ntBASIC6.59□□□□□ -1.35
CTDP1Q9Y5B0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.59□□□□□ -1.35
CTDP1Q9Y5B0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.59□□□□□ -1.35
CTDP1Q9Y5B0 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CTDP1Q9Y5B0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.59□□□□□ -1.35
CTDP1Q9Y5B0 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CTDP1Q9Y5B0 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.59□□□□□ -1.36
CTDP1Q9Y5B0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
CTDP1Q9Y5B0 AL606537.1-201ENST00000607258 2011 ntBASIC6.59□□□□□ -1.36
CTDP1Q9Y5B0 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CTDP1Q9Y5B0 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.59□□□□□ -1.36
CTDP1Q9Y5B0 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.59□□□□□ -1.36
CTDP1Q9Y5B0 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 RNA5SP131-201ENST00000365452 119 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 RNU6-298P-201ENST00000390888 96 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AL121977.1-201ENST00000401636 979 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AL391422.1-201ENST00000402155 436 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AL355615.1-201ENST00000406187 641 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 RNU4-27P-201ENST00000410889 139 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AL365220.1-201ENST00000432923 399 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 CFL1P1-202ENST00000432948 411 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 LYPLA1P1-201ENST00000434514 622 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 KATNBL1P3-201ENST00000443475 909 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AL163193.1-201ENST00000444895 788 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 OR6K5P-201ENST00000447050 945 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 RPL7P39-201ENST00000481157 744 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 NPM1P29-201ENST00000483112 803 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AP000563.1-201ENST00000490865 758 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 MTND4LP2-201ENST00000502312 285 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AC008638.1-201ENST00000506035 866 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AC010476.1-201ENST00000519111 851 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 MTCYBP23-201ENST00000558717 1102 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AGGF1P9-201ENST00000561884 913 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AC016180.1-201ENST00000567945 403 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AC005951.1-201ENST00000576706 485 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AC005242.1-201ENST00000585658 438 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AC110760.3-201ENST00000598794 467 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AC091057.2-201ENST00000602594 792 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AC008536.1-201ENST00000602872 669 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 OR7A19P-201ENST00000608051 733 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AC092954.1-201ENST00000609121 445 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 Z95327.3-201ENST00000610385 572 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AC078880.5-201ENST00000617845 421 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 AC005840.5-201ENST00000619166 599 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 MIR8080-201ENST00000622224 89 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 OR5AC4P-202ENST00000642086 985 ntBASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTDP1Q9Y5B0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms