Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 RNU6-618P-201ENST00000363518 112 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 RNU6-1251P-201ENST00000364502 107 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 RNU1-74P-201ENST00000384108 171 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 C4BPAP1-201ENST00000415474 1893 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 EI24P4-201ENST00000423683 1078 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AL139148.1-201ENST00000427122 680 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AL161722.2-201ENST00000434731 981 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AL627308.1-201ENST00000435693 821 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 RPS29P10-201ENST00000439197 166 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 RN7SL727P-201ENST00000482164 296 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 RNA5SP92-201ENST00000516437 110 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AC027308.1-201ENST00000517993 110 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AC008147.3-201ENST00000548666 354 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AC016180.1-201ENST00000567945 403 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 PRPF19P1-201ENST00000584766 898 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AC019072.1-201ENST00000604535 1551 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AC118658.2-201ENST00000618697 459 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AC090527.3-201ENST00000619041 548 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 RNU1-43P-201ENST00000365052 165 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 RNA5SP223-201ENST00000365174 120 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 SNORD65-201ENST00000391079 73 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 RNU4-34P-201ENST00000410431 124 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AC007064.3-201ENST00000422608 359 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 RPS4XP16-201ENST00000427198 791 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 GAPDHP58-201ENST00000438477 1006 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AC245047.2-201ENST00000441060 530 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 FAR2P1-206ENST00000449736 709 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 RPS4XP12-201ENST00000461747 709 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AC079841.1-201ENST00000481228 950 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AC072052.1-201ENST00000496556 306 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AC134349.2-201ENST00000535136 910 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AC068993.1-201ENST00000546724 589 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AC122134.1-201ENST00000565664 1104 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AC022884.2-201ENST00000578535 580 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms