Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AL451142.2-201ENST00000429076 2090 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 LINC01109-201ENST00000603837 3081 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 MIR105-1-201ENST00000385222 81 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 U3.32-201ENST00000408116 212 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 EIF4A1P3-201ENST00000411521 244 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AL513325.1-201ENST00000417716 1034 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AC092570.3-201ENST00000420113 693 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AL133325.1-201ENST00000421090 382 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AC104333.2-201ENST00000422630 192 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 NANOGP4-201ENST00000427230 913 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 CYCSP12-201ENST00000437729 300 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 BX842559.2-201ENST00000451418 605 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 SETP20-201ENST00000457046 852 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AC023141.9-201ENST00000458734 412 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AC079168.1-201ENST00000458741 345 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AP000942.1-201ENST00000463969 747 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 RPSAP39-201ENST00000467439 883 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AC022336.1-201ENST00000475510 337 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 RPL7P40-201ENST00000481703 745 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 RN7SL184P-201ENST00000488308 297 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 UBA52P3-201ENST00000491303 382 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 RN7SL447P-201ENST00000494711 245 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AC113398.2-201ENST00000507630 558 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AC009597.2-201ENST00000604659 592 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AL359513.1-201ENST00000614364 557 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AL356274.1-201ENST00000617064 410 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AC131238.1-201ENST00000617135 328 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 AC005840.5-201ENST00000619166 599 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 KARSP1-201ENST00000451871 1752 ntBASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RHBDD3Q9Y3P4 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 RNA5SP242-201ENST00000364171 118 ntBASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AL390774.1-201ENST00000411924 246 ntBASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 OR13Z1P-201ENST00000416141 834 ntBASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AC099336.2-201ENST00000422457 254 ntBASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 CYCSP6-201ENST00000434498 302 ntBASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 RPS11P7-201ENST00000442125 465 ntBASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 CASP3P1-201ENST00000446037 609 ntBASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AC099560.2-201ENST00000457554 255 ntBASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 RPEP1-201ENST00000504507 658 ntBASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 RNA5SP373-201ENST00000517271 95 ntBASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms