Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.44
CLIP2Q9UDT6 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.02□□□□□ -1.44
CLIP2Q9UDT6 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 RN7SKP74-201ENST00000362849 309 ntBASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 SNORA51.8-201ENST00000384234 132 ntBASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 AL133270.1-201ENST00000402635 279 ntBASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 AC090018.1-201ENST00000434369 367 ntBASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 RHOT1P3-201ENST00000436571 331 ntBASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 RPL34P20-201ENST00000442771 351 ntBASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 KNOP1P3-201ENST00000446933 426 ntBASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 AC020779.1-201ENST00000478757 796 ntBASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 RN7SKP260-201ENST00000516907 149 ntBASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 AP000859.1-201ENST00000525536 307 ntBASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 AP001922.4-201ENST00000526967 290 ntBASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 MIR4691-201ENST00000583764 85 ntBASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 AL353662.3-201ENST00000625131 237 ntBASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 MTCO1P15-201ENST00000529569 1526 ntBASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CLIP2Q9UDT6 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 AC104260.2-201ENST00000623551 3497 ntBASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 SMG1P7-201ENST00000565246 2704 ntBASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 AL022322.2-201ENST00000624072 20397 ntBASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 AC103591.2-201ENST00000265259 766 ntBASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 AL078599.1-201ENST00000402075 293 ntBASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 RBMY2KP-201ENST00000418221 992 ntBASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 DDX39BP1-205ENST00000422507 192 ntBASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 SUMO2P1-206ENST00000445436 284 ntBASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 NDUFA5P8-201ENST00000449019 346 ntBASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 RN7SL814P-201ENST00000487715 300 ntBASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 RN7SL244P-201ENST00000493405 297 ntBASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 NIFKP7-201ENST00000503365 834 ntBASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 AC005000.1-201ENST00000536192 288 ntBASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 BNIP3P41-202ENST00000616656 861 ntBASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 AC091905.4-201ENST00000623432 202 ntBASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 AC100778.3-201ENST00000580060 1750 ntBASIC6.01□□□□□ -1.45
CLIP2Q9UDT6 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLIP2Q9UDT6 INTS6P1-201ENST00000504674 2530 ntBASIC6□□□□□ -1.45
CLIP2Q9UDT6 SCARNA15-201ENST00000607520 4325 ntBASIC6□□□□□ -1.45
CLIP2Q9UDT6 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CLIP2Q9UDT6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLIP2Q9UDT6 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6□□□□□ -1.45
CLIP2Q9UDT6 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CLIP2Q9UDT6 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLIP2Q9UDT6 PCNPP4-201ENST00000414817 517 ntBASIC6□□□□□ -1.45
CLIP2Q9UDT6 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6□□□□□ -1.45
CLIP2Q9UDT6 AC013268.2-201ENST00000420753 337 ntBASIC6□□□□□ -1.45
CLIP2Q9UDT6 HSPE1P16-201ENST00000426640 348 ntBASIC6□□□□□ -1.45
CLIP2Q9UDT6 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6□□□□□ -1.45
CLIP2Q9UDT6 TRY2P-201ENST00000448860 689 ntBASIC6□□□□□ -1.45
CLIP2Q9UDT6 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
CLIP2Q9UDT6 OR8A2P-201ENST00000528631 952 ntBASIC6□□□□□ -1.45
CLIP2Q9UDT6 OR5D15P-201ENST00000531671 942 ntBASIC6□□□□□ -1.45
CLIP2Q9UDT6 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms