Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 TMX2P1-201ENST00000436507 708 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AL450263.2-201ENST00000439400 589 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 SCAND3P1-201ENST00000439854 1060 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 TCEA1P1-201ENST00000449716 880 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 IGHV5-78-201ENST00000450948 295 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AC007386.1-201ENST00000455212 582 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AC009127.1-201ENST00000467090 155 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 RN7SL346P-201ENST00000491561 294 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AC073358.1-201ENST00000505671 684 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AL358913.1-201ENST00000554342 121 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AC084759.1-201ENST00000561168 290 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 QTRT1P1-201ENST00000604344 1078 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AC245100.2-201ENST00000454544 1679 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 DDX18P5-201ENST00000534547 1306 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 AC011493.1-201ENST00000596753 1632 ntBASIC4.68□□□□□ -1.66
VAPAQ9P0L0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 AC097461.1-201ENST00000568928 2821 ntBASIC4.68□□□□□ -1.66
VAPAQ9P0L0 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 AL592291.1-201ENST00000403830 352 ntBASIC4.68□□□□□ -1.66
VAPAQ9P0L0 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.68□□□□□ -1.66
VAPAQ9P0L0 SNORA79B-201ENST00000410557 148 ntBASIC4.68□□□□□ -1.66
VAPAQ9P0L0 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 AL354714.3-201ENST00000447284 493 ntBASIC4.68□□□□□ -1.66
VAPAQ9P0L0 AL445433.1-201ENST00000457507 257 ntBASIC4.68□□□□□ -1.66
VAPAQ9P0L0 CYCSP34-201ENST00000458172 304 ntBASIC4.68□□□□□ -1.66
VAPAQ9P0L0 RPL21P6-201ENST00000479171 504 ntBASIC4.68□□□□□ -1.66
VAPAQ9P0L0 PPIAP19-201ENST00000486414 492 ntBASIC4.68□□□□□ -1.66
VAPAQ9P0L0 AGGF1P3-201ENST00000493675 1213 ntBASIC4.68□□□□□ -1.66
VAPAQ9P0L0 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 PGAM1P13-201ENST00000507497 754 ntBASIC4.68□□□□□ -1.66
VAPAQ9P0L0 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 RN7SKP46-201ENST00000515942 234 ntBASIC4.68□□□□□ -1.66
VAPAQ9P0L0 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 AC020978.7-201ENST00000575953 1187 ntBASIC4.68□□□□□ -1.66
VAPAQ9P0L0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 AL133268.1-201ENST00000405676 1401 ntBASIC4.68□□□□□ -1.66
VAPAQ9P0L0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.68□□□□□ -1.66
VAPAQ9P0L0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 AL034370.1-201ENST00000397254 1590 ntBASIC4.67□□□□□ -1.66
VAPAQ9P0L0 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 ECM1P2-201ENST00000503354 1577 ntBASIC4.67□□□□□ -1.66
VAPAQ9P0L0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 RPL35AP24-201ENST00000413846 330 ntBASIC4.67□□□□□ -1.66
VAPAQ9P0L0 AC012519.1-201ENST00000424588 610 ntBASIC4.67□□□□□ -1.66
VAPAQ9P0L0 FABP7P2-201ENST00000429946 379 ntBASIC4.67□□□□□ -1.66
VAPAQ9P0L0 AC092162.1-201ENST00000432828 434 ntBASIC4.67□□□□□ -1.66
VAPAQ9P0L0 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 RPSAP41-201ENST00000439695 860 ntBASIC4.67□□□□□ -1.66
VAPAQ9P0L0 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms