Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AP000919.1-202ENST00000581139 1264 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 SUMO2P14-201ENST00000604488 293 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AC008115.3-201ENST00000614874 549 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AL590396.4-201ENST00000636779 956 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 OR13C1P-202ENST00000641378 2919 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC025470.1-201ENST00000510053 2032 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC003973.3-201ENST00000624863 2822 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 RN7SKP185-201ENST00000362813 326 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 RN7SKP292-201ENST00000365522 317 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 RNU6-1005P-201ENST00000384519 107 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 MIR551A-201ENST00000385042 96 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 U3.28-201ENST00000391249 210 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 GAPDHP42-201ENST00000406848 981 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AL133173.1-201ENST00000423458 397 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 PTP4A1P7-201ENST00000423476 514 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 RIMKLBP2-201ENST00000424737 654 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 PCNPP2-201ENST00000441651 455 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 RRM2P4-201ENST00000441721 562 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 RPS27P5-201ENST00000444247 244 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 RPL21P18-201ENST00000469899 480 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 RPL21P47-201ENST00000483696 477 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC133963.2-201ENST00000513686 578 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC026407.1-201ENST00000518369 204 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC118942.1-201ENST00000529674 1035 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 EIF4A2P5-201ENST00000529914 499 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AP004609.2-201ENST00000532177 190 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC010547.6-201ENST00000571789 193 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 MIR4675-201ENST00000577898 77 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC068020.1-201ENST00000594215 661 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC130352.1-201ENST00000602979 661 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 OR7A19P-201ENST00000608051 733 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC025574.2-201ENST00000615621 514 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AL356274.1-201ENST00000617064 410 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC008691.1-209ENST00000642094 814 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AL031595.2-201ENST00000624215 19071 ntBASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDK5RAP3Q96JB5 AC140134.1-201ENST00000511830 3544 ntBASIC6.24□□□□□ -1.41
CDK5RAP3Q96JB5 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDK5RAP3Q96JB5 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.24□□□□□ -1.41
CDK5RAP3Q96JB5 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.24□□□□□ -1.41
CDK5RAP3Q96JB5 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDK5RAP3Q96JB5 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CDK5RAP3Q96JB5 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.24□□□□□ -1.41
CDK5RAP3Q96JB5 RNA5SP122-201ENST00000384457 108 ntBASIC6.24□□□□□ -1.41
CDK5RAP3Q96JB5 MT-TP-201ENST00000387461 68 ntBASIC6.24□□□□□ -1.41
CDK5RAP3Q96JB5 EI24P3-201ENST00000399046 1062 ntBASIC6.24□□□□□ -1.41
CDK5RAP3Q96JB5 AL136131.1-201ENST00000406079 803 ntBASIC6.24□□□□□ -1.41
CDK5RAP3Q96JB5 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CDK5RAP3Q96JB5 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 216.4 ms