Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AP005403.1-201ENST00000579720 229 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 GAS5-AS1-201ENST00000602767 694 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AL451064.1-201ENST00000607718 471 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AC093783.1-201ENST00000612976 329 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 RMST_10.1-201ENST00000616309 154 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AC112255.1-201ENST00000624070 2493 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AC093671.1-201ENST00000624981 2929 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 OOSP1-201ENST00000398992 1270 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 XKRYP4-201ENST00000414395 483 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 MTCYBP29-201ENST00000436327 1006 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 XKRYP5-201ENST00000449659 483 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 PSAT1P4-201ENST00000466500 526 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 AC117394.1-201ENST00000477323 567 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 IGBP1P4-201ENST00000503202 879 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 HPRT1P1-201ENST00000509498 657 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 AC060775.1-201ENST00000518241 520 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 OR8G3P-201ENST00000533406 921 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 OR11H3P-201ENST00000554547 982 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 RN7SL290P-201ENST00000578661 300 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 H3F3BP2-201ENST00000583907 357 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 MIR7853-201ENST00000584820 132 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 AC009779.8-202ENST00000607990 932 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 AC135068.5-201ENST00000624197 983 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 GVINP1-202ENST00000531871 7271 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 AL355578.1-201ENST00000607405 1328 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 AL078621.3-201ENST00000623707 2042 ntBASIC5.69□□□□□ -1.5
ATG4AQ8WYN0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC004158.1-201ENST00000564508 4319 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 RNA5SP394-201ENST00000364216 119 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 RNA5SP131-201ENST00000365452 119 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 OR13C3-201ENST00000374781 1108 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 SNORA11.5-201ENST00000408163 128 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AL138787.1-202ENST00000437804 898 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AL358876.1-201ENST00000453364 1075 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC019084.1-201ENST00000457337 432 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms