Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AL157702.1-201ENST00000398764 426 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 RPL21P111-201ENST00000418453 477 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AC008173.1-201ENST00000418901 264 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AL157884.1-201ENST00000424561 454 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AKR1B10P1-201ENST00000425765 942 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 PA2G4P6-201ENST00000438325 1197 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AC093019.1-201ENST00000443135 252 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 RN7SL643P-201ENST00000471845 291 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AC092824.1-201ENST00000483524 576 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AC023632.1-201ENST00000518463 375 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 MIR3154-201ENST00000577829 84 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 MIR5095-201ENST00000578844 88 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AL078623.1-201ENST00000602702 907 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 MIR6811-201ENST00000620409 58 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AC017002.4-201ENST00000604721 1525 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AKAP17BP-201ENST00000431706 2719 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AC005332.9-201ENST00000620266 2921 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AL133243.4-201ENST00000623116 3109 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 CASC19-206ENST00000641028 1430 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 OR56A4-201ENST00000330728 1209 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 SNORD16-201ENST00000362803 99 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 Y_RNA.192-201ENST00000363977 102 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 Y_RNA.465-201ENST00000384293 102 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AC008171.1-201ENST00000395058 200 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 YWHAZP6-201ENST00000399764 738 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 CCNG1P1-201ENST00000406783 885 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 RPL21P108-201ENST00000413857 481 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AL591212.2-201ENST00000433923 257 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 EMC3-AS1-205ENST00000438698 534 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 OR2AF1P-201ENST00000454899 889 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 ST13P14-201ENST00000474095 734 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 RPL12P31-201ENST00000478433 450 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AC021678.1-201ENST00000505195 936 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AC110792.2-201ENST00000510278 224 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 RNA5SP303-201ENST00000516192 130 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 IGHV4-55-201ENST00000520889 368 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 DEFB130C-202ENST00000530001 230 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AC020765.1-201ENST00000604296 328 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AL158196.1-201ENST00000616786 434 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 PCMTD1P7-201ENST00000634506 357 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 AC025809.2-201ENST00000625085 1802 ntBASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms