Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 TCEA1P2-201ENST00000420496 906 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AC115285.1-201ENST00000424879 736 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 FMO7P-201ENST00000436045 768 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AC012075.1-201ENST00000436549 580 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AC004854.1-201ENST00000440356 349 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AC021205.1-201ENST00000468797 348 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 PRELID3BP6-201ENST00000503839 571 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 RNU6-1004P-201ENST00000516584 111 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 OR8Q1P-201ENST00000526467 655 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 IGBP1P1-201ENST00000554337 1009 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AL121594.4-201ENST00000556211 1196 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 MIR1269B-201ENST00000580405 75 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AC060780.2-201ENST00000589047 198 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AL451049.1-201ENST00000608672 497 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AC010435.1-201ENST00000623353 1177 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 CU639417.4-201ENST00000623928 207 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AC083865.1-201ENST00000636634 831 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 AC006927.2-201ENST00000639256 389 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 SRRM1P3-201ENST00000426911 2678 ntBASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CCDC33Q8N5R6 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 MRE11P1-201ENST00000464884 2127 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 RNU4-31P-201ENST00000384211 141 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 RPS27AP11-201ENST00000402798 447 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 AL034374.1-201ENST00000406329 351 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 SNORA79B-201ENST00000410557 148 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 AC096533.1-201ENST00000411645 353 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 AL596448.1-201ENST00000415024 392 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 AC106883.1-201ENST00000418805 562 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 EIF4A1P1-201ENST00000420241 934 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 PTP4A1P7-201ENST00000423476 514 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 CFL1P1-202ENST00000432948 411 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 AC005297.1-201ENST00000444765 862 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 RN7SL799P-201ENST00000475891 298 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 RNA5SP34-201ENST00000516887 130 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 AL049830.4-201ENST00000555149 351 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 DPPA2P4-201ENST00000563717 878 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 AC096996.1-201ENST00000563813 325 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 RN7SL339P-201ENST00000580597 296 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 AC024023.1-201ENST00000624530 922 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 AC079776.5-201ENST00000641920 211 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms