Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 U3.32-201ENST00000408116 212 ntBASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 SETP15-201ENST00000412724 337 ntBASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 GJA6P-201ENST00000415117 1042 ntBASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 AC244453.4-201ENST00000419150 388 ntBASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 BRWD1P3-201ENST00000428816 390 ntBASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 RBMY2QP-201ENST00000429799 1147 ntBASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 AC012512.1-201ENST00000446594 718 ntBASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 IGHV5-78-201ENST00000450948 295 ntBASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 AC093270.2-201ENST00000486157 792 ntBASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 RPL32P9-201ENST00000487963 407 ntBASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 RPL37AP8-201ENST00000494116 276 ntBASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 RNA5SP43-201ENST00000516559 110 ntBASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 AP005262.1-201ENST00000582646 997 ntBASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
C9orf40Q8IXQ3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 TRIM51GP-201ENST00000534741 1350 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 RNU4-23P-201ENST00000362839 140 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 AL078599.1-201ENST00000402075 293 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 NACAP7-201ENST00000407371 609 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 COX5BP7-201ENST00000414780 274 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 AC096644.3-201ENST00000416788 338 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 AC007394.1-201ENST00000421941 531 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 COX6CP13-201ENST00000428703 226 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 LYPLA1P1-201ENST00000434514 622 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 RPS29P9-201ENST00000440360 171 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 TCEA1P1-201ENST00000449716 880 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 HMGN1P8-201ENST00000463578 288 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 RN7SL329P-201ENST00000467740 299 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 NIFKP7-201ENST00000503365 834 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 AC100784.1-201ENST00000522790 310 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 NMNAT1P1-201ENST00000554095 876 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 AC007448.1-201ENST00000582714 234 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 AC117490.2-201ENST00000610042 594 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 SCARNA15-201ENST00000607520 4325 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 AC022417.1-201ENST00000624768 1303 ntBASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
C9orf40Q8IXQ3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 RN7SKP104-201ENST00000362605 328 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 SNORA74A-201ENST00000364089 198 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 SNORA58B-201ENST00000364259 136 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms