Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 Y_RNA.695-201ENST00000516715 107 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 RNA5SP400-201ENST00000517155 111 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AC060788.1-201ENST00000521318 469 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AC044913.1-201ENST00000557200 430 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 MIR4801-201ENST00000582704 82 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AP001823.1-201ENST00000604056 1003 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AC006924.1-201ENST00000610750 559 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AL352984.2-201ENST00000611153 546 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 RFPL4AP6-201ENST00000616792 846 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AL607023.1-201ENST00000620045 248 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AC011504.1-201ENST00000623331 4103 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 ZNF833P-201ENST00000424938 1494 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AC138393.1-206ENST00000540997 1886 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 RNU6-517P-201ENST00000384362 110 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 Y_RNA.553-201ENST00000384670 102 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 MT-TH-201ENST00000387441 69 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 SNORA26.8-201ENST00000391306 124 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 TANK-206ENST00000406287 875 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AL390774.1-201ENST00000411924 246 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AL139421.1-201ENST00000423010 169 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 C8orf59P1-201ENST00000429930 303 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 PPIAP10-201ENST00000438675 458 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 MTCO1P19-201ENST00000443487 500 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AL929288.2-201ENST00000446368 407 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 HSPE1P22-201ENST00000456856 327 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AC068228.1-201ENST00000461723 211 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AC098847.1-201ENST00000473094 348 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 RPL30P6-201ENST00000475925 342 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 RPL23AP37-201ENST00000479658 549 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 RPS6P4-201ENST00000494693 758 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 DSTNP2-201ENST00000504533 515 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 Y_RNA.710-201ENST00000516975 110 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 BCAS2P1-201ENST00000528022 632 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 UBE2NP1-201ENST00000545592 458 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AC012435.1-202ENST00000568772 240 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 ISCA1P3-201ENST00000577104 373 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AC008759.1-201ENST00000589783 983 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AP000238.1-201ENST00000608759 426 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AC019131.2-201ENST00000609071 870 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AC018755.4-201ENST00000619715 454 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AC022509.4-201ENST00000621404 572 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms