Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.62□□□□□ -1.51
RFX6Q8HWS3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFX6Q8HWS3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
RFX6Q8HWS3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.62□□□□□ -1.51
RFX6Q8HWS3 AC112255.1-201ENST00000624070 2493 ntBASIC5.62□□□□□ -1.51
RFX6Q8HWS3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 RNU6-1251P-201ENST00000364502 107 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 RNA5SP122-201ENST00000384457 108 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 RNA5SP284-201ENST00000384547 118 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 MIR137-201ENST00000385223 102 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 U3.23-201ENST00000391132 200 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 SNORA79B-201ENST00000410557 148 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 RNU4-27P-201ENST00000410889 139 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 GLUD1P9-201ENST00000420997 1173 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 RPL7AP49-201ENST00000429522 581 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AL591438.1-201ENST00000433508 581 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AL157884.3-201ENST00000448273 1184 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 CCRL1P1-201ENST00000449542 1053 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 CBX1P2-201ENST00000453841 458 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AC084754.1-201ENST00000463466 464 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AC007998.1-201ENST00000474156 672 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 PPM1AP1-201ENST00000502740 1135 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 NRBF2P4-201ENST00000520874 850 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AC092709.1-201ENST00000521355 1045 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 MTCO1P15-201ENST00000529569 1526 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AC004923.2-201ENST00000529649 369 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AL358913.1-201ENST00000554342 121 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AP004372.1-201ENST00000604842 844 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AP005229.2-201ENST00000609980 697 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 AC019080.5-201ENST00000624891 757 ntBASIC5.61□□□□□ -1.51
RFX6Q8HWS3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFX6Q8HWS3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 RNU1-146P-201ENST00000364015 165 ntBASIC5.6□□□□□ -1.51
RFX6Q8HWS3 MIR621-201ENST00000384919 96 ntBASIC5.6□□□□□ -1.51
RFX6Q8HWS3 BMS1P17-202ENST00000416720 316 ntBASIC5.6□□□□□ -1.51
RFX6Q8HWS3 HYALP1-201ENST00000417674 1279 ntBASIC5.6□□□□□ -1.51
RFX6Q8HWS3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 KCTD9P1-201ENST00000430462 1167 ntBASIC5.6□□□□□ -1.51
RFX6Q8HWS3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 RPL12P17-201ENST00000432393 498 ntBASIC5.6□□□□□ -1.51
RFX6Q8HWS3 RPL19P16-201ENST00000433839 588 ntBASIC5.6□□□□□ -1.51
RFX6Q8HWS3 GSTM5P1-201ENST00000434751 660 ntBASIC5.6□□□□□ -1.51
RFX6Q8HWS3 AC046176.1-201ENST00000435260 1170 ntBASIC5.6□□□□□ -1.51
RFX6Q8HWS3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 AC064862.4-201ENST00000442180 334 ntBASIC5.6□□□□□ -1.51
RFX6Q8HWS3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 AC073109.1-201ENST00000445066 978 ntBASIC5.6□□□□□ -1.51
RFX6Q8HWS3 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 AL096829.2-201ENST00000446582 742 ntBASIC5.6□□□□□ -1.51
RFX6Q8HWS3 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 RPL23AP23-201ENST00000452590 471 ntBASIC5.6□□□□□ -1.51
RFX6Q8HWS3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.6□□□□□ -1.51
RFX6Q8HWS3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.6□□□□□ -1.51
RFX6Q8HWS3 MIR4505-201ENST00000582238 73 ntBASIC5.6□□□□□ -1.51
RFX6Q8HWS3 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms