Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 THAP12P8-201ENST00000447914 2115 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 OR9G4-201ENST00000302957 984 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 RNA5SP319-201ENST00000362768 119 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 U3.7-201ENST00000363668 216 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 RN7SKP81-201ENST00000365603 331 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 MTND4P24-201ENST00000424002 397 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 XKRY2-201ENST00000442362 1093 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 GAPDHP25-201ENST00000447061 1001 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 EIF1P7-201ENST00000487533 337 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC093720.1-201ENST00000505681 714 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC112673.1-201ENST00000513168 575 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 RNA5SP373-201ENST00000517271 95 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AP003355.1-201ENST00000518956 587 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC022404.1-201ENST00000555320 273 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 NMNAT1P5-201ENST00000559657 841 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC005341.1-201ENST00000571086 708 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 MTCYBP13-201ENST00000578634 1093 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AL162431.4-201ENST00000604674 411 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC064807.4-201ENST00000607201 407 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC004477.3-201ENST00000614061 590 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AL359513.1-201ENST00000614364 557 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC079395.3-201ENST00000615161 484 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 MIR6839-201ENST00000620425 113 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC126544.2-201ENST00000625174 749 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC068137.4-201ENST00000638485 296 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 AP000473.2-201ENST00000602659 1537 ntBASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZNF549Q6P9A3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF549Q6P9A3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
ZNF549Q6P9A3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF549Q6P9A3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
ZNF549Q6P9A3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF549Q6P9A3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
ZNF549Q6P9A3 AC112198.2-201ENST00000426589 6996 ntBASIC5.27□□□□□ -1.57
ZNF549Q6P9A3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
ZNF549Q6P9A3 RNU1-19P-201ENST00000363306 165 ntBASIC5.27□□□□□ -1.57
ZNF549Q6P9A3 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF549Q6P9A3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
ZNF549Q6P9A3 SNORA48.4-201ENST00000391089 134 ntBASIC5.27□□□□□ -1.57
ZNF549Q6P9A3 U3.23-201ENST00000391132 200 ntBASIC5.27□□□□□ -1.57
ZNF549Q6P9A3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.27□□□□□ -1.57
ZNF549Q6P9A3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.27□□□□□ -1.57
ZNF549Q6P9A3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms