Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC245389.2-201ENST00000616023 576 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 AC242843.1-201ENST00000618702 573 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 MIR193BHG-214ENST00000641765 509 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 RBMY1HP-201ENST00000382759 1389 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 GNL2P1-201ENST00000451274 2190 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PDLIM3Q53GG5 ABCC13-202ENST00000463099 3842 ntBASIC4.71□□□□□ -1.65
PDLIM3Q53GG5 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC007342.7-201ENST00000624610 2337 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 RNU1-134P-201ENST00000362935 165 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 RNU4-44P-201ENST00000363050 141 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 BMS1P3-201ENST00000372011 932 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 GCNT6-201ENST00000379591 934 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 RNU6-178P-201ENST00000384631 104 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 RNA5SP91-201ENST00000390902 119 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 NCSTNP1-201ENST00000406229 144 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC016397.1-201ENST00000412463 242 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 RPL23AP27-201ENST00000415161 451 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC093155.2-201ENST00000420734 937 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 BX284632.2-201ENST00000421091 399 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 MORF4L1P7-201ENST00000426038 703 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 MTND2P2-201ENST00000434633 945 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AL445928.1-201ENST00000435545 222 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC002504.1-201ENST00000438281 691 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC099063.2-201ENST00000446360 662 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 FTLP8-201ENST00000446770 267 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC073909.1-201ENST00000447112 999 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 RPS23P9-201ENST00000448848 438 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 HIGD1AP8-201ENST00000453927 274 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 RNU1-88P-201ENST00000459274 128 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC006463.2-201ENST00000473326 348 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC092902.1-201ENST00000486999 259 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC106806.2-201ENST00000509365 500 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 HMGN1P15-201ENST00000513870 295 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 CR383658.1-201ENST00000514609 734 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 RN7SKP66-201ENST00000516681 231 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC103833.1-201ENST00000517442 172 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC113192.3-201ENST00000529152 742 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AP000648.1-201ENST00000529682 397 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 HMGN2P6-201ENST00000551091 273 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC004825.1-201ENST00000555068 586 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 MIR4505-201ENST00000582238 73 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AL031601.1-201ENST00000605702 394 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC242628.1-201ENST00000606810 391 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC144521.1-201ENST00000607148 956 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AL645927.2-201ENST00000618350 349 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC010435.1-201ENST00000623353 1177 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AC097372.4-201ENST00000625025 466 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 OR8G3P-202ENST00000641572 1255 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 FBXL21-201ENST00000297158 1305 ntBASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms