Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SLC35E1P1-201ENST00000419313 864 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.68□□□□□ -1.66
RFX4Q33E94 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.68□□□□□ -1.66
RFX4Q33E94 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.68□□□□□ -1.66
RFX4Q33E94 SNRPFP2-201ENST00000440710 251 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 AL589765.3-201ENST00000446084 462 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 OTX2P1-201ENST00000450956 354 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 YWHAEP1-201ENST00000453697 763 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RFX4Q33E94 AC239798.3-201ENST00000454459 408 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 RPL7P45-201ENST00000455851 743 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.68□□□□□ -1.66
RFX4Q33E94 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.68□□□□□ -1.66
RFX4Q33E94 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.68□□□□□ -1.66
RFX4Q33E94 AC012400.1-201ENST00000518452 381 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RFX4Q33E94 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.68□□□□□ -1.66
RFX4Q33E94 AC010547.7-201ENST00000570323 333 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.68□□□□□ -1.66
RFX4Q33E94 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.68□□□□□ -1.66
RFX4Q33E94 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.68□□□□□ -1.66
RFX4Q33E94 RN7SL787P-201ENST00000613000 284 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 AC127024.6-201ENST00000621598 424 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 AL691477.1-201ENST00000624398 162 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.68□□□□□ -1.66
RFX4Q33E94 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFX4Q33E94 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.68□□□□□ -1.66
RFX4Q33E94 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFX4Q33E94 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.68□□□□□ -1.66
RFX4Q33E94 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RFX4Q33E94 AL929601.4-201ENST00000613011 1341 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFX4Q33E94 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RFX4Q33E94 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
RFX4Q33E94 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
RFX4Q33E94 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RFX4Q33E94 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFX4Q33E94 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFX4Q33E94 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
RFX4Q33E94 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFX4Q33E94 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
RFX4Q33E94 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.67□□□□□ -1.66
RFX4Q33E94 AL034370.1-201ENST00000397254 1590 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFX4Q33E94 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RFX4Q33E94 RN7SKP124-201ENST00000364730 341 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFX4Q33E94 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.67□□□□□ -1.66
RFX4Q33E94 SNORA2.3-201ENST00000383920 135 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 AL592291.1-201ENST00000403830 352 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 AC013268.2-201ENST00000420753 337 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 EIF4HP2-201ENST00000424380 563 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 RPS29P14-201ENST00000431518 171 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 AC012075.1-201ENST00000436549 580 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.67□□□□□ -1.66
RFX4Q33E94 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.67□□□□□ -1.66
RFX4Q33E94 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFX4Q33E94 AC002553.2-201ENST00000453217 340 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 RPL35AP19-201ENST00000469425 329 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 AC100832.1-201ENST00000471945 383 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
RFX4Q33E94 OR9N1P-201ENST00000491296 333 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 AC022616.2-201ENST00000523185 300 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.67□□□□□ -1.66
RFX4Q33E94 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.67□□□□□ -1.66
RFX4Q33E94 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFX4Q33E94 AP002373.2-201ENST00000541631 1060 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.67□□□□□ -1.66
RFX4Q33E94 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFX4Q33E94 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.67□□□□□ -1.66
RFX4Q33E94 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.67□□□□□ -1.66
RFX4Q33E94 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.67□□□□□ -1.66
RFX4Q33E94 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.67□□□□□ -1.66
RFX4Q33E94 RN7SL52P-201ENST00000584271 284 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.67□□□□□ -1.66
RFX4Q33E94 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.67□□□□□ -1.66
RFX4Q33E94 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.67□□□□□ -1.66
RFX4Q33E94 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.67□□□□□ -1.66
RFX4Q33E94 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.67□□□□□ -1.66
RFX4Q33E94 MIR8080-201ENST00000622224 89 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 AC006840.1-201ENST00000623069 542 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
RFX4Q33E94 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
RFX4Q33E94 AC135068.12-201ENST00000637370 931 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 AL596275.2-204ENST00000641628 552 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 AL596275.2-206ENST00000641957 626 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.67□□□□□ -1.66
RFX4Q33E94 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.67□□□□□ -1.66
RFX4Q33E94 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
RFX4Q33E94 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFX4Q33E94 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFX4Q33E94 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFX4Q33E94 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.67□□□□□ -1.66
RFX4Q33E94 AL606537.1-201ENST00000607258 2011 ntBASIC4.67□□□□□ -1.66
RFX4Q33E94 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
RFX4Q33E94 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.66□□□□□ -1.66
RFX4Q33E94 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
RFX4Q33E94 AL031985.1-201ENST00000392713 418 ntBASIC4.66□□□□□ -1.66
RFX4Q33E94 AL391422.1-201ENST00000402155 436 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms