Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 MIR4270-201ENST00000581799 70 ntBASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SHROOM1Q2M3G4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SHROOM1Q2M3G4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHROOM1Q2M3G4 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.9□□□□□ -1.47
SHROOM1Q2M3G4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
SHROOM1Q2M3G4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHROOM1Q2M3G4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHROOM1Q2M3G4 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SHROOM1Q2M3G4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 AL450345.1-202ENST00000605741 3881 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 RN7SKP153-201ENST00000365026 316 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 RNA5SP113-201ENST00000410486 84 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 OR2B7P-201ENST00000429302 934 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 RPL7AP49-201ENST00000429522 581 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 AL591438.1-201ENST00000433508 581 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 AC090018.1-201ENST00000434369 367 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 MTND2P40-201ENST00000436718 841 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 RPL7AP61-201ENST00000443410 636 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 OR7E125P-201ENST00000443450 846 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 AC023271.1-201ENST00000445936 1090 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 AL354714.3-201ENST00000447284 493 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 RPL23AP72-201ENST00000492447 435 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 AC021193.1-201ENST00000511607 420 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 AC020910.3-201ENST00000603701 874 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 Z98755.1-201ENST00000407015 1384 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 AC010928.1-201ENST00000592477 1447 ntBASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SHROOM1Q2M3G4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AL355488.2-201ENST00000609909 2850 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AC107021.2-201ENST00000567714 2095 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 RNA5SP223-201ENST00000365174 120 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 MIR192-201ENST00000384915 110 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 HMGB3P7-201ENST00000400214 611 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AC016397.1-201ENST00000412463 242 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AC069213.2-201ENST00000420238 366 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 RPL12P43-201ENST00000420608 499 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 BTG3P1-201ENST00000435859 716 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AC073264.2-201ENST00000448886 166 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 RPL23AP56-201ENST00000460778 453 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 RN7SL346P-201ENST00000491561 294 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AC093720.1-201ENST00000505681 714 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 GAPDHP56-201ENST00000506031 988 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AC022360.1-201ENST00000521058 340 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AP006289.1-201ENST00000538089 277 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 MIR3667-201ENST00000581025 74 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AC068790.7-201ENST00000602347 528 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AL356608.1-201ENST00000610034 820 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AC007786.3-201ENST00000615154 596 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms