Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 FGB-207ENST00000509493 1164 ntTSL 5 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AC135626.1-201ENST00000556983 435 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AC087468.1-201ENST00000604365 630 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AL162431.4-201ENST00000604674 411 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AC104695.2-201ENST00000605056 775 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 MIR6861-201ENST00000618657 64 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AL357153.4-201ENST00000620487 1016 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AC079298.2-201ENST00000623885 459 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 MIR1910-201ENST00000636955 80 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AL133243.3-201ENST00000617415 3004 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 MED23-203ENST00000368058 4576 ntTSL 5 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AL121834.1-202ENST00000404494 277 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 MIR1282-201ENST00000408865 101 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 GABARAPL3-201ENST00000412799 354 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC092570.3-201ENST00000420113 693 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC009238.2-201ENST00000431026 355 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 SNRPFP2-201ENST00000440710 251 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AL035090.1-201ENST00000454835 332 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 EIF2S2P5-201ENST00000457635 968 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC108161.1-201ENST00000461060 402 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 RPL23AP37-201ENST00000479658 549 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 UBA52P3-201ENST00000491303 382 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 RPL10P14-201ENST00000565265 298 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC122134.1-201ENST00000565664 1104 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 BNIP3P35-201ENST00000604530 490 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC015982.1-201ENST00000608113 465 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC244517.3-201ENST00000616254 1235 ntBASIC3.91□□□□□ -1.78
HIST1H1AQ02539 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HIST1H1AQ02539 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
HIST1H1AQ02539 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.9□□□□□ -1.78
HIST1H1AQ02539 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
HIST1H1AQ02539 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.9□□□□□ -1.78
HIST1H1AQ02539 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
HIST1H1AQ02539 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HIST1H1AQ02539 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HIST1H1AQ02539 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HIST1H1AQ02539 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AL031985.1-201ENST00000392713 418 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AL035079.1-201ENST00000405210 287 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AL390316.1-201ENST00000406279 553 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AC013429.2-201ENST00000418798 781 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 RPS29P14-201ENST00000431518 171 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms