Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SUMO3P55854 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.45□□□□□ -1.54
SUMO3P55854 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.45□□□□□ -1.54
SUMO3P55854 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SUMO3P55854 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SUMO3P55854 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.45□□□□□ -1.54
SUMO3P55854 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SUMO3P55854 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SUMO3P55854 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.44□□□□□ -1.54
SUMO3P55854 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SUMO3P55854 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SUMO3P55854 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SUMO3P55854 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.44□□□□□ -1.54
SUMO3P55854 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SUMO3P55854 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SUMO3P55854 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.44□□□□□ -1.54
SUMO3P55854 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SUMO3P55854 MIR130B-202ENST00000385018 82 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SUMO3P55854 ATP5F1P2-201ENST00000398143 760 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 IFIT1P1-201ENST00000400497 1449 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SUMO3P55854 RNU2-18P-201ENST00000411224 162 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 AC114814.2-201ENST00000419195 485 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SUMO3P55854 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.44□□□□□ -1.54
SUMO3P55854 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.44□□□□□ -1.54
SUMO3P55854 SETP8-201ENST00000435341 628 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AL445928.1-201ENST00000435545 222 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AL031663.1-201ENST00000437445 219 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 TUBB4BP6-201ENST00000437576 479 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 DNAJA1P5-201ENST00000440278 943 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AC092809.1-201ENST00000441469 474 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 RPS7P3-201ENST00000443360 580 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 BMS1P10-201ENST00000443754 1120 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.44□□□□□ -1.54
SUMO3P55854 AC007327.1-201ENST00000447461 264 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.44□□□□□ -1.54
SUMO3P55854 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.44□□□□□ -1.54
SUMO3P55854 GEMIN2P1-201ENST00000454246 752 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 USP9YP25-201ENST00000457708 443 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AC023194.2-201ENST00000465398 406 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 MTND2P14-201ENST00000482139 351 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.44□□□□□ -1.54
SUMO3P55854 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.44□□□□□ -1.54
SUMO3P55854 AC098799.3-201ENST00000506095 438 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.44□□□□□ -1.54
SUMO3P55854 AC118282.2-201ENST00000508739 374 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.44□□□□□ -1.54
SUMO3P55854 RNU6-416P-201ENST00000516265 103 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 IGLVIV-64-201ENST00000518581 301 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 HMGB1P23-201ENST00000518743 568 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SUMO3P55854 AC011853.1-201ENST00000518911 454 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.44□□□□□ -1.54
SUMO3P55854 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.44□□□□□ -1.54
SUMO3P55854 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SUMO3P55854 AC024405.1-201ENST00000532521 1042 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SUMO3P55854 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SUMO3P55854 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.44□□□□□ -1.54
SUMO3P55854 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.44□□□□□ -1.54
SUMO3P55854 AC009094.1-201ENST00000564443 426 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.44□□□□□ -1.54
SUMO3P55854 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 AC022662.1-201ENST00000580252 331 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AC005412.1-201ENST00000580812 1049 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AP005119.1-201ENST00000580956 292 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.44□□□□□ -1.54
SUMO3P55854 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SUMO3P55854 AC002069.2-201ENST00000603580 883 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AL353726.1-201ENST00000614041 1000 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 AL158163.2-201ENST00000619110 700 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AC091304.6-201ENST00000619761 202 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SUMO3P55854 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SUMO3P55854 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.44□□□□□ -1.54
SUMO3P55854 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.44□□□□□ -1.54
SUMO3P55854 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.44□□□□□ -1.54
SUMO3P55854 SNX18P3-202ENST00000565670 1750 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.44□□□□□ -1.54
SUMO3P55854 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SUMO3P55854 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SUMO3P55854 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms