Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 PANDAR-201ENST00000629595 1506 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
PKNOX1P55347 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.9□□□□□ -1.62
PKNOX1P55347 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
PKNOX1P55347 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
PKNOX1P55347 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PKNOX1P55347 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PKNOX1P55347 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.9□□□□□ -1.63
PKNOX1P55347 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.9□□□□□ -1.63
PKNOX1P55347 RPL7L1P9-201ENST00000431298 745 ntBASIC4.9□□□□□ -1.63
PKNOX1P55347 RPS29P9-201ENST00000440360 171 ntBASIC4.9□□□□□ -1.63
PKNOX1P55347 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.9□□□□□ -1.63
PKNOX1P55347 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.9□□□□□ -1.63
PKNOX1P55347 AC090568.1-201ENST00000509499 856 ntBASIC4.9□□□□□ -1.63
PKNOX1P55347 ENPP7P9-201ENST00000514456 627 ntBASIC4.9□□□□□ -1.63
PKNOX1P55347 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.9□□□□□ -1.63
PKNOX1P55347 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.9□□□□□ -1.63
PKNOX1P55347 AL049830.4-201ENST00000555149 351 ntBASIC4.9□□□□□ -1.63
PKNOX1P55347 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.9□□□□□ -1.63
PKNOX1P55347 AC095055.1-201ENST00000603472 1113 ntBASIC4.9□□□□□ -1.63
PKNOX1P55347 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.9□□□□□ -1.63
PKNOX1P55347 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.9□□□□□ -1.63
PKNOX1P55347 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.9□□□□□ -1.63
PKNOX1P55347 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PKNOX1P55347 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.9□□□□□ -1.63
PKNOX1P55347 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PKNOX1P55347 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
PKNOX1P55347 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PKNOX1P55347 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.9□□□□□ -1.63
PKNOX1P55347 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PKNOX1P55347 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
PKNOX1P55347 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
PKNOX1P55347 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PKNOX1P55347 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKNOX1P55347 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
PKNOX1P55347 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PKNOX1P55347 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PKNOX1P55347 AC068446.1-201ENST00000556425 1549 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PKNOX1P55347 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.89□□□□□ -1.63
PKNOX1P55347 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.89□□□□□ -1.63
PKNOX1P55347 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.89□□□□□ -1.63
PKNOX1P55347 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PKNOX1P55347 LRRC37BP1-201ENST00000398851 714 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.89□□□□□ -1.63
PKNOX1P55347 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.89□□□□□ -1.63
PKNOX1P55347 AL450023.3-201ENST00000440592 271 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.89□□□□□ -1.63
PKNOX1P55347 AL031584.1-201ENST00000447169 754 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.89□□□□□ -1.63
PKNOX1P55347 RPL7P39-201ENST00000481157 744 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 AC090686.1-201ENST00000481577 749 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 AC108693.1-201ENST00000496068 432 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 RN7SL591P-201ENST00000496150 292 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.89□□□□□ -1.63
PKNOX1P55347 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.89□□□□□ -1.63
PKNOX1P55347 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.89□□□□□ -1.63
PKNOX1P55347 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.89□□□□□ -1.63
PKNOX1P55347 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PKNOX1P55347 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.89□□□□□ -1.63
PKNOX1P55347 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PKNOX1P55347 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.89□□□□□ -1.63
PKNOX1P55347 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.89□□□□□ -1.63
PKNOX1P55347 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.89□□□□□ -1.63
PKNOX1P55347 AP005901.4-201ENST00000577336 569 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 AC015982.1-201ENST00000608113 465 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 AC079395.2-201ENST00000610982 737 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 AC004477.3-201ENST00000614061 590 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 AP005212.4-201ENST00000614206 710 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 AC073575.2-201ENST00000614212 627 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 MIR8069-1-201ENST00000616627 86 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.89□□□□□ -1.63
PKNOX1P55347 MIR8069-2-201ENST00000621412 86 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 AC074140.1-201ENST00000621617 208 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PKNOX1P55347 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.89□□□□□ -1.63
PKNOX1P55347 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PKNOX1P55347 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKNOX1P55347 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKNOX1P55347 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.89□□□□□ -1.63
PKNOX1P55347 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.89□□□□□ -1.63
PKNOX1P55347 AC021242.1-201ENST00000507315 2035 ntBASIC4.89□□□□□ -1.63
PKNOX1P55347 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PKNOX1P55347 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.88□□□□□ -1.63
PKNOX1P55347 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PKNOX1P55347 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PKNOX1P55347 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PKNOX1P55347 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PKNOX1P55347 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PKNOX1P55347 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.88□□□□□ -1.63
PKNOX1P55347 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PKNOX1P55347 SNORA17.1-201ENST00000362945 126 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 SNORA73.1-201ENST00000363107 205 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms