Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH13P55290 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH13P55290 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH13P55290 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
CDH13P55290 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.15□□□□□ -1.58
CDH13P55290 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDH13P55290 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDH13P55290 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
CDH13P55290 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDH13P55290 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDH13P55290 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDH13P55290 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDH13P55290 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDH13P55290 AP001002.1-201ENST00000625148 1513 ntBASIC5.15□□□□□ -1.58
CDH13P55290 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDH13P55290 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDH13P55290 RNA5SP284-201ENST00000384547 118 ntBASIC5.15□□□□□ -1.59
CDH13P55290 EI24P3-201ENST00000399046 1062 ntBASIC5.15□□□□□ -1.59
CDH13P55290 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH13P55290 AL590806.1-201ENST00000415818 853 ntBASIC5.15□□□□□ -1.59
CDH13P55290 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH13P55290 FTLP19-201ENST00000433300 394 ntBASIC5.15□□□□□ -1.59
CDH13P55290 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH13P55290 AC023512.1-201ENST00000444513 499 ntBASIC5.15□□□□□ -1.59
CDH13P55290 GAPDHP25-201ENST00000447061 1001 ntBASIC5.15□□□□□ -1.59
CDH13P55290 AC104634.1-201ENST00000452720 462 ntBASIC5.15□□□□□ -1.59
CDH13P55290 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.15□□□□□ -1.59
CDH13P55290 AC084754.1-201ENST00000463466 464 ntBASIC5.15□□□□□ -1.59
CDH13P55290 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.15□□□□□ -1.59
CDH13P55290 AC094085.1-201ENST00000468914 584 ntBASIC5.15□□□□□ -1.59
CDH13P55290 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH13P55290 RWDD4P1-201ENST00000488019 565 ntBASIC5.15□□□□□ -1.59
CDH13P55290 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDH13P55290 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH13P55290 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH13P55290 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
CDH13P55290 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH13P55290 OR8A2P-201ENST00000528631 952 ntBASIC5.15□□□□□ -1.59
CDH13P55290 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
CDH13P55290 YWHABP2-201ENST00000540201 713 ntBASIC5.15□□□□□ -1.59
CDH13P55290 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH13P55290 BLZF2P-201ENST00000553776 1130 ntBASIC5.15□□□□□ -1.59
CDH13P55290 AL358913.1-201ENST00000554342 121 ntBASIC5.15□□□□□ -1.59
CDH13P55290 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH13P55290 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH13P55290 RBM22P1-201ENST00000578589 1214 ntBASIC5.15□□□□□ -1.59
CDH13P55290 AC127024.5-201ENST00000580085 462 ntBASIC5.15□□□□□ -1.59
CDH13P55290 MIR1273E-201ENST00000581165 102 ntBASIC5.15□□□□□ -1.59
CDH13P55290 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH13P55290 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH13P55290 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH13P55290 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDH13P55290 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
CDH13P55290 AL645927.2-201ENST00000618350 349 ntBASIC5.15□□□□□ -1.59
CDH13P55290 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH13P55290 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH13P55290 AC063976.2-201ENST00000425667 3556 ntBASIC5.15□□□□□ -1.59
CDH13P55290 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDH13P55290 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDH13P55290 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CDH13P55290 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH13P55290 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDH13P55290 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CDH13P55290 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH13P55290 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH13P55290 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH13P55290 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH13P55290 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDH13P55290 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CDH13P55290 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH13P55290 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CDH13P55290 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH13P55290 AC023421.1-201ENST00000590535 1785 ntBASIC5.14□□□□□ -1.59
CDH13P55290 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH13P55290 AC114947.2-201ENST00000565748 2125 ntBASIC5.14□□□□□ -1.59
CDH13P55290 MTCO1P15-201ENST00000529569 1526 ntBASIC5.14□□□□□ -1.59
CDH13P55290 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
CDH13P55290 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CDH13P55290 RAD1P1-201ENST00000231383 813 ntBASIC5.14□□□□□ -1.59
CDH13P55290 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH13P55290 RNA5SP234-201ENST00000363916 119 ntBASIC5.14□□□□□ -1.59
CDH13P55290 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH13P55290 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CDH13P55290 OOSP1-201ENST00000398992 1270 ntBASIC5.14□□□□□ -1.59
CDH13P55290 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH13P55290 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH13P55290 OR6K4P-201ENST00000423179 955 ntBASIC5.14□□□□□ -1.59
CDH13P55290 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH13P55290 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH13P55290 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH13P55290 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH13P55290 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH13P55290 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH13P55290 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH13P55290 SEPT7P3-201ENST00000455017 621 ntBASIC5.14□□□□□ -1.59
CDH13P55290 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.14□□□□□ -1.59
CDH13P55290 RN7SL51P-201ENST00000468230 285 ntBASIC5.14□□□□□ -1.59
CDH13P55290 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH13P55290 AC037198.2-201ENST00000478845 733 ntBASIC5.14□□□□□ -1.59
CDH13P55290 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms