Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.39□□□□□ -1.39
EPHB3P54753 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
EPHB3P54753 AL512605.1-202ENST00000441919 381 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 MTCO1P19-201ENST00000443487 500 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 AL359955.2-201ENST00000445380 353 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 AC073072.2-201ENST00000447425 348 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 AP006222.1-205ENST00000450734 457 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 OR52E3P-201ENST00000452083 936 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 HCG17-214ENST00000453558 732 ntTSL 5 BASIC6.39□□□□□ -1.39
EPHB3P54753 AC027673.1-201ENST00000456245 405 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.39□□□□□ -1.39
EPHB3P54753 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.39□□□□□ -1.39
EPHB3P54753 RPL23AP44-201ENST00000482216 473 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 AC069304.1-201ENST00000491593 704 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
EPHB3P54753 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.39□□□□□ -1.39
EPHB3P54753 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.39□□□□□ -1.39
EPHB3P54753 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.39□□□□□ -1.39
EPHB3P54753 AL121766.1-201ENST00000547436 487 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 AC079600.1-201ENST00000550326 297 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC6.39□□□□□ -1.39
EPHB3P54753 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.39□□□□□ -1.39
EPHB3P54753 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.39□□□□□ -1.39
EPHB3P54753 MIR3189-201ENST00000578735 73 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC6.39□□□□□ -1.39
EPHB3P54753 AC015688.2-201ENST00000584523 262 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.39□□□□□ -1.39
EPHB3P54753 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.39□□□□□ -1.39
EPHB3P54753 AC011445.2-201ENST00000599274 173 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.39□□□□□ -1.39
EPHB3P54753 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC6.39□□□□□ -1.39
EPHB3P54753 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
EPHB3P54753 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.39□□□□□ -1.39
EPHB3P54753 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
EPHB3P54753 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
EPHB3P54753 MTND4P23-201ENST00000447723 1363 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
EPHB3P54753 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
EPHB3P54753 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.39□□□□□ -1.39
EPHB3P54753 AC006042.3-201ENST00000454684 1469 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.39□□□□□ -1.39
EPHB3P54753 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.39□□□□□ -1.39
EPHB3P54753 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
EPHB3P54753 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
EPHB3P54753 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.38□□□□□ -1.39
EPHB3P54753 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
EPHB3P54753 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.38□□□□□ -1.39
EPHB3P54753 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
EPHB3P54753 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
EPHB3P54753 AC012254.3-201ENST00000591183 2117 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
EPHB3P54753 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
EPHB3P54753 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.38□□□□□ -1.39
EPHB3P54753 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
EPHB3P54753 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.38□□□□□ -1.39
EPHB3P54753 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
EPHB3P54753 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
EPHB3P54753 AP000866.6-201ENST00000638898 3579 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
EPHB3P54753 RNU6-797P-201ENST00000363101 109 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.38□□□□□ -1.39
EPHB3P54753 AL096711.1-201ENST00000404780 554 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 USP9YP33-201ENST00000412220 421 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 MTND1P21-201ENST00000412991 285 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AC004074.1-201ENST00000421810 1063 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC6.38□□□□□ -1.39
EPHB3P54753 AC012519.1-201ENST00000424588 610 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 CENPIP1-201ENST00000425713 902 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC6.38□□□□□ -1.39
EPHB3P54753 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 YWHAZP7-201ENST00000436906 631 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 COX7BP2-201ENST00000437976 242 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC6.38□□□□□ -1.39
EPHB3P54753 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.38□□□□□ -1.39
EPHB3P54753 AP000936.2-201ENST00000447151 681 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.38□□□□□ -1.39
EPHB3P54753 SUMO2P2-201ENST00000456482 255 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AC073594.1-201ENST00000462065 364 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AL122020.1-201ENST00000472287 459 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
EPHB3P54753 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC6.38□□□□□ -1.39
EPHB3P54753 AC008885.2-201ENST00000509506 930 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AC011411.1-201ENST00000509592 876 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 PGBD4P4-201ENST00000509673 613 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 CDC42P4-201ENST00000510507 563 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AC008837.1-201ENST00000511513 412 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.38□□□□□ -1.39
EPHB3P54753 RNU6-528P-201ENST00000516926 100 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 RN7SKP98-201ENST00000517070 156 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AC073581.1-201ENST00000519036 575 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AP002963.1-201ENST00000530590 184 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.38□□□□□ -1.39
EPHB3P54753 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.38□□□□□ -1.39
EPHB3P54753 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.38□□□□□ -1.39
EPHB3P54753 ZNF322P1-201ENST00000568013 1209 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 MIR4776-2-201ENST00000580204 80 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.38□□□□□ -1.39
EPHB3P54753 AL583832.1-201ENST00000603227 784 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AC025449.1-201ENST00000603896 529 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms