Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PDX1P52945 AP000550.3-201ENST00000637734 379 ntBASIC5.14□□□□□ -1.59
PDX1P52945 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDX1P52945 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.14□□□□□ -1.59
PDX1P52945 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.14□□□□□ -1.59
PDX1P52945 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDX1P52945 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDX1P52945 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PDX1P52945 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.14□□□□□ -1.59
PDX1P52945 AL359715.3-201ENST00000569267 2123 ntBASIC5.14□□□□□ -1.59
PDX1P52945 DDX6P1-205ENST00000441966 1436 ntBASIC5.14□□□□□ -1.59
PDX1P52945 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.14□□□□□ -1.59
PDX1P52945 NAMPTP1-201ENST00000440465 2514 ntBASIC5.14□□□□□ -1.59
PDX1P52945 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
PDX1P52945 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDX1P52945 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.13□□□□□ -1.59
PDX1P52945 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDX1P52945 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.13□□□□□ -1.59
PDX1P52945 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.13□□□□□ -1.59
PDX1P52945 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDX1P52945 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PDX1P52945 AC004158.1-201ENST00000564508 4319 ntBASIC5.13□□□□□ -1.59
PDX1P52945 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDX1P52945 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PDX1P52945 AC003985.2-201ENST00000562268 1669 ntBASIC5.13□□□□□ -1.59
PDX1P52945 MIR133A2-201ENST00000347538 102 ntBASIC5.13□□□□□ -1.59
PDX1P52945 RNU1-146P-201ENST00000364015 165 ntBASIC5.13□□□□□ -1.59
PDX1P52945 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.13□□□□□ -1.59
PDX1P52945 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.13□□□□□ -1.59
PDX1P52945 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PDX1P52945 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PDX1P52945 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.13□□□□□ -1.59
PDX1P52945 AC211486.3-201ENST00000412694 621 ntBASIC5.13□□□□□ -1.59
PDX1P52945 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.13□□□□□ -1.59
PDX1P52945 AL034379.1-201ENST00000423216 253 ntBASIC5.13□□□□□ -1.59
PDX1P52945 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.13□□□□□ -1.59
PDX1P52945 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.13□□□□□ -1.59
PDX1P52945 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.13□□□□□ -1.59
PDX1P52945 RPL17P35-201ENST00000432217 549 ntBASIC5.13□□□□□ -1.59
PDX1P52945 NPM1P18-201ENST00000434232 732 ntBASIC5.13□□□□□ -1.59
PDX1P52945 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.13□□□□□ -1.59
PDX1P52945 AP000949.1-201ENST00000438328 629 ntBASIC5.13□□□□□ -1.59
PDX1P52945 AC006466.1-201ENST00000438721 289 ntBASIC5.13□□□□□ -1.59
PDX1P52945 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.13□□□□□ -1.59
PDX1P52945 RPS11P7-201ENST00000442125 465 ntBASIC5.13□□□□□ -1.59
PDX1P52945 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.13□□□□□ -1.59
PDX1P52945 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDX1P52945 AC092647.2-201ENST00000452998 253 ntBASIC5.13□□□□□ -1.59
PDX1P52945 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.13□□□□□ -1.59
PDX1P52945 AC090543.1-201ENST00000492168 485 ntBASIC5.13□□□□□ -1.59
PDX1P52945 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDX1P52945 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.13□□□□□ -1.59
PDX1P52945 AC021106.1-201ENST00000509020 1058 ntBASIC5.13□□□□□ -1.59
PDX1P52945 OR4V1P-201ENST00000525394 1140 ntBASIC5.13□□□□□ -1.59
PDX1P52945 AC079064.1-201ENST00000528365 362 ntBASIC5.13□□□□□ -1.59
PDX1P52945 AC134349.2-201ENST00000535136 910 ntBASIC5.13□□□□□ -1.59
PDX1P52945 YWHABP2-201ENST00000540201 713 ntBASIC5.13□□□□□ -1.59
PDX1P52945 LINC00557-201ENST00000563184 1279 ntBASIC5.13□□□□□ -1.59
PDX1P52945 MTND2P13-201ENST00000577438 1039 ntBASIC5.13□□□□□ -1.59
PDX1P52945 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.13□□□□□ -1.59
PDX1P52945 OR4H6P-202ENST00000603819 340 ntBASIC5.13□□□□□ -1.59
PDX1P52945 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.13□□□□□ -1.59
PDX1P52945 AL512506.1-201ENST00000613918 449 ntBASIC5.13□□□□□ -1.59
PDX1P52945 AC020978.9-201ENST00000624380 1141 ntBASIC5.13□□□□□ -1.59
PDX1P52945 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDX1P52945 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDX1P52945 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDX1P52945 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
PDX1P52945 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.13□□□□□ -1.59
PDX1P52945 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.13□□□□□ -1.59
PDX1P52945 AC010266.2-201ENST00000564741 3255 ntBASIC5.13□□□□□ -1.59
PDX1P52945 Z95331.1-201ENST00000623075 23112 ntBASIC5.13□□□□□ -1.59
PDX1P52945 AC016745.2-201ENST00000608834 3443 ntBASIC5.13□□□□□ -1.59
PDX1P52945 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDX1P52945 PANDAR-201ENST00000629595 1506 ntBASIC5.13□□□□□ -1.59
PDX1P52945 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
PDX1P52945 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDX1P52945 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDX1P52945 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
PDX1P52945 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDX1P52945 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.12□□□□□ -1.59
PDX1P52945 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.12□□□□□ -1.59
PDX1P52945 SNURFL-201ENST00000309296 343 ntBASIC5.12□□□□□ -1.59
PDX1P52945 SNORA51.8-201ENST00000384234 132 ntBASIC5.12□□□□□ -1.59
PDX1P52945 SNORD56.6-201ENST00000384569 71 ntBASIC5.12□□□□□ -1.59
PDX1P52945 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.12□□□□□ -1.59
PDX1P52945 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.12□□□□□ -1.59
PDX1P52945 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.12□□□□□ -1.59
PDX1P52945 AC104837.2-201ENST00000427236 424 ntBASIC5.12□□□□□ -1.59
PDX1P52945 AL049745.1-201ENST00000433953 286 ntBASIC5.12□□□□□ -1.59
PDX1P52945 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDX1P52945 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.12□□□□□ -1.59
PDX1P52945 AL353718.1-201ENST00000451028 517 ntBASIC5.12□□□□□ -1.59
PDX1P52945 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.12□□□□□ -1.59
PDX1P52945 AP002345.1-201ENST00000456493 928 ntBASIC5.12□□□□□ -1.59
PDX1P52945 PSAT1P4-201ENST00000466500 526 ntBASIC5.12□□□□□ -1.59
PDX1P52945 AC007686.1-201ENST00000488511 463 ntBASIC5.12□□□□□ -1.59
PDX1P52945 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.12□□□□□ -1.59
PDX1P52945 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.12□□□□□ -1.59
PDX1P52945 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms