Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC083923.1-201ENST00000523708 376 ntBASIC5.94□□□□□ -1.46
NEK3P51956 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.94□□□□□ -1.46
NEK3P51956 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NEK3P51956 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.94□□□□□ -1.46
NEK3P51956 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.94□□□□□ -1.46
NEK3P51956 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NEK3P51956 AC084759.1-201ENST00000561168 290 ntBASIC5.94□□□□□ -1.46
NEK3P51956 AC012146.2-201ENST00000576545 416 ntBASIC5.94□□□□□ -1.46
NEK3P51956 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.94□□□□□ -1.46
NEK3P51956 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.94□□□□□ -1.46
NEK3P51956 AC015712.7-201ENST00000615211 635 ntBASIC5.94□□□□□ -1.46
NEK3P51956 AP005431.1-201ENST00000618479 319 ntBASIC5.94□□□□□ -1.46
NEK3P51956 AL669942.2-201ENST00000620352 697 ntBASIC5.94□□□□□ -1.46
NEK3P51956 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.94□□□□□ -1.46
NEK3P51956 AC099654.9-201ENST00000637055 678 ntBASIC5.94□□□□□ -1.46
NEK3P51956 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.94□□□□□ -1.46
NEK3P51956 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.94□□□□□ -1.46
NEK3P51956 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NEK3P51956 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NEK3P51956 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
NEK3P51956 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEK3P51956 AC100871.1-201ENST00000507871 1456 ntBASIC5.94□□□□□ -1.46
NEK3P51956 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEK3P51956 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NEK3P51956 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NEK3P51956 AL645568.2-201ENST00000432815 1337 ntBASIC5.94□□□□□ -1.46
NEK3P51956 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NEK3P51956 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.93□□□□□ -1.46
NEK3P51956 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEK3P51956 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NEK3P51956 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NEK3P51956 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NEK3P51956 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEK3P51956 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEK3P51956 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NEK3P51956 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEK3P51956 MIR375-201ENST00000362103 64 ntBASIC5.93□□□□□ -1.46
NEK3P51956 RN7SKP69-201ENST00000365390 305 ntBASIC5.93□□□□□ -1.46
NEK3P51956 MIR122-201ENST00000385044 85 ntBASIC5.93□□□□□ -1.46
NEK3P51956 RNA5SP178-201ENST00000410380 128 ntBASIC5.93□□□□□ -1.46
NEK3P51956 AC092745.2-202ENST00000411880 369 ntBASIC5.93□□□□□ -1.46
NEK3P51956 GSTM3P2-201ENST00000412746 530 ntBASIC5.93□□□□□ -1.46
NEK3P51956 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.93□□□□□ -1.46
NEK3P51956 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.93□□□□□ -1.46
NEK3P51956 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.93□□□□□ -1.46
NEK3P51956 AK4P4-201ENST00000419465 646 ntBASIC5.93□□□□□ -1.46
NEK3P51956 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.93□□□□□ -1.46
NEK3P51956 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.93□□□□□ -1.46
NEK3P51956 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.93□□□□□ -1.46
NEK3P51956 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.93□□□□□ -1.46
NEK3P51956 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NEK3P51956 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.93□□□□□ -1.46
NEK3P51956 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.93□□□□□ -1.46
NEK3P51956 AC002542.1-201ENST00000440683 193 ntBASIC5.93□□□□□ -1.46
NEK3P51956 AL161636.2-201ENST00000445179 927 ntBASIC5.93□□□□□ -1.46
NEK3P51956 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.93□□□□□ -1.46
NEK3P51956 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.93□□□□□ -1.46
NEK3P51956 AC008280.2-201ENST00000455473 307 ntBASIC5.93□□□□□ -1.46
NEK3P51956 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.93□□□□□ -1.46
NEK3P51956 AC005229.2-201ENST00000456995 399 ntBASIC5.93□□□□□ -1.46
NEK3P51956 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.93□□□□□ -1.46
NEK3P51956 AC005912.1-201ENST00000495392 255 ntBASIC5.93□□□□□ -1.46
NEK3P51956 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.93□□□□□ -1.46
NEK3P51956 AC104108.1-201ENST00000509930 412 ntBASIC5.93□□□□□ -1.46
NEK3P51956 AC010285.3-201ENST00000511668 676 ntBASIC5.93□□□□□ -1.46
NEK3P51956 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.93□□□□□ -1.46
NEK3P51956 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.93□□□□□ -1.46
NEK3P51956 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.93□□□□□ -1.46
NEK3P51956 HMGN2P36-201ENST00000529541 409 ntBASIC5.93□□□□□ -1.46
NEK3P51956 CYB5AP5-201ENST00000549779 389 ntBASIC5.93□□□□□ -1.46
NEK3P51956 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.93□□□□□ -1.46
NEK3P51956 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.93□□□□□ -1.46
NEK3P51956 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.93□□□□□ -1.46
NEK3P51956 AL163952.1-202ENST00000569625 600 ntBASIC5.93□□□□□ -1.46
NEK3P51956 TXNP4-201ENST00000575018 310 ntBASIC5.93□□□□□ -1.46
NEK3P51956 RN7SL622P-201ENST00000585292 275 ntBASIC5.93□□□□□ -1.46
NEK3P51956 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.93□□□□□ -1.46
NEK3P51956 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.93□□□□□ -1.46
NEK3P51956 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.93□□□□□ -1.46
NEK3P51956 VN1R87P-201ENST00000596706 487 ntBASIC5.93□□□□□ -1.46
NEK3P51956 AC145423.1-201ENST00000605712 336 ntBASIC5.93□□□□□ -1.46
NEK3P51956 AC018754.1-201ENST00000607486 925 ntBASIC5.93□□□□□ -1.46
NEK3P51956 AL133481.2-203ENST00000607558 139 ntBASIC5.93□□□□□ -1.46
NEK3P51956 AC006946.3-201ENST00000609791 756 ntBASIC5.93□□□□□ -1.46
NEK3P51956 U6.48-201ENST00000618523 106 ntBASIC5.93□□□□□ -1.46
NEK3P51956 AC022079.2-201ENST00000619739 566 ntBASIC5.93□□□□□ -1.46
NEK3P51956 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEK3P51956 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.93□□□□□ -1.46
NEK3P51956 AC073342.3-201ENST00000624211 193 ntBASIC5.93□□□□□ -1.46
NEK3P51956 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.93□□□□□ -1.46
NEK3P51956 AL137141.1-201ENST00000624622 4836 ntBASIC5.93□□□□□ -1.46
NEK3P51956 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
NEK3P51956 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.93□□□□□ -1.46
NEK3P51956 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.93□□□□□ -1.46
NEK3P51956 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.93□□□□□ -1.46
NEK3P51956 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
NEK3P51956 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NEK3P51956 AC019072.1-201ENST00000604535 1551 ntBASIC5.93□□□□□ -1.46
NEK3P51956 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NEK3P51956 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms