Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USP11P51784 SNORD8-201ENST00000363915 110 ntBASIC7.09□□□□□ -1.27
USP11P51784 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USP11P51784 RAB5CP1-201ENST00000395972 580 ntBASIC7.09□□□□□ -1.27
USP11P51784 RPL7P58-201ENST00000402913 758 ntBASIC7.09□□□□□ -1.27
USP11P51784 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC7.09□□□□□ -1.27
USP11P51784 TRBV24OR9-2-201ENST00000416632 435 ntBASIC7.09□□□□□ -1.27
USP11P51784 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC7.09□□□□□ -1.27
USP11P51784 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.09□□□□□ -1.27
USP11P51784 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USP11P51784 ARL6IP1P2-201ENST00000431356 563 ntBASIC7.09□□□□□ -1.27
USP11P51784 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.09□□□□□ -1.27
USP11P51784 AC241584.1-201ENST00000438469 1241 ntBASIC7.09□□□□□ -1.27
USP11P51784 AC016908.1-201ENST00000442571 1219 ntBASIC7.09□□□□□ -1.27
USP11P51784 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC7.09□□□□□ -1.27
USP11P51784 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.09□□□□□ -1.27
USP11P51784 AL022237.1-201ENST00000446663 358 ntBASIC7.09□□□□□ -1.27
USP11P51784 AC007327.1-201ENST00000447461 264 ntBASIC7.09□□□□□ -1.27
USP11P51784 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC7.09□□□□□ -1.27
USP11P51784 RPL7L1P3-201ENST00000455249 689 ntBASIC7.09□□□□□ -1.27
USP11P51784 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC7.09□□□□□ -1.27
USP11P51784 GTF2IP12-201ENST00000456547 356 ntBASIC7.09□□□□□ -1.27
USP11P51784 RN7SL254P-201ENST00000460609 284 ntBASIC7.09□□□□□ -1.27
USP11P51784 AC107015.1-201ENST00000466902 747 ntBASIC7.09□□□□□ -1.27
USP11P51784 AC069528.1-202ENST00000482888 637 ntBASIC7.09□□□□□ -1.27
USP11P51784 AC041039.1-201ENST00000485656 536 ntBASIC7.09□□□□□ -1.27
USP11P51784 PDCL3P4-201ENST00000489621 720 ntBASIC7.09□□□□□ -1.27
USP11P51784 AC023050.1-201ENST00000498198 304 ntBASIC7.09□□□□□ -1.27
USP11P51784 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.09□□□□□ -1.27
USP11P51784 SNX18P24-201ENST00000505249 671 ntBASIC7.09□□□□□ -1.27
USP11P51784 PRDX4P1-201ENST00000507189 574 ntBASIC7.09□□□□□ -1.27
USP11P51784 AC090958.1-201ENST00000511122 351 ntBASIC7.09□□□□□ -1.27
USP11P51784 HSD3BP3-201ENST00000514706 994 ntBASIC7.09□□□□□ -1.27
USP11P51784 AC116347.2-201ENST00000514912 523 ntBASIC7.09□□□□□ -1.27
USP11P51784 HIGD1AP18-201ENST00000520730 278 ntBASIC7.09□□□□□ -1.27
USP11P51784 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.09□□□□□ -1.27
USP11P51784 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.09□□□□□ -1.27
USP11P51784 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.09□□□□□ -1.27
USP11P51784 AC012414.6-201ENST00000568241 401 ntBASIC7.09□□□□□ -1.27
USP11P51784 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC7.09□□□□□ -1.27
USP11P51784 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.09□□□□□ -1.27
USP11P51784 NPIPB1P-202ENST00000588786 828 ntBASIC7.09□□□□□ -1.27
USP11P51784 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.09□□□□□ -1.27
USP11P51784 AL121873.1-201ENST00000616013 524 ntBASIC7.09□□□□□ -1.27
USP11P51784 AC015660.5-201ENST00000623238 564 ntBASIC7.09□□□□□ -1.27
USP11P51784 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
USP11P51784 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USP11P51784 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USP11P51784 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
USP11P51784 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC7.09□□□□□ -1.27
USP11P51784 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USP11P51784 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.09□□□□□ -1.27
USP11P51784 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USP11P51784 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USP11P51784 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.28
USP11P51784 AP003486.1-201ENST00000525716 3994 ntBASIC7.09□□□□□ -1.28
USP11P51784 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.09□□□□□ -1.28
USP11P51784 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
USP11P51784 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
USP11P51784 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.08□□□□□ -1.28
USP11P51784 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
USP11P51784 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.08□□□□□ -1.28
USP11P51784 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USP11P51784 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USP11P51784 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
USP11P51784 AL391994.1-201ENST00000254724 282 ntBASIC7.08□□□□□ -1.28
USP11P51784 OR56B2P-201ENST00000317102 954 ntBASIC7.08□□□□□ -1.28
USP11P51784 NACA3P-201ENST00000359690 648 ntBASIC7.08□□□□□ -1.28
USP11P51784 RNU4-21P-201ENST00000362802 126 ntBASIC7.08□□□□□ -1.28
USP11P51784 RNA5SP232-201ENST00000364144 119 ntBASIC7.08□□□□□ -1.28
USP11P51784 RN7SKP237-201ENST00000364663 301 ntBASIC7.08□□□□□ -1.28
USP11P51784 Y_RNA.408-201ENST00000383987 102 ntBASIC7.08□□□□□ -1.28
USP11P51784 RNU6-1200P-201ENST00000384162 107 ntBASIC7.08□□□□□ -1.28
USP11P51784 MIR621-201ENST00000384919 96 ntBASIC7.08□□□□□ -1.28
USP11P51784 MIR1275-201ENST00000408770 80 ntBASIC7.08□□□□□ -1.28
USP11P51784 RNU2-17P-201ENST00000410290 190 ntBASIC7.08□□□□□ -1.28
USP11P51784 RNU2-66P-201ENST00000410650 161 ntBASIC7.08□□□□□ -1.28
USP11P51784 RN7SKP144-201ENST00000411108 279 ntBASIC7.08□□□□□ -1.28
USP11P51784 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7.08□□□□□ -1.28
USP11P51784 AC007899.1-201ENST00000412776 775 ntBASIC7.08□□□□□ -1.28
USP11P51784 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC7.08□□□□□ -1.28
USP11P51784 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USP11P51784 XKRYP4-201ENST00000414395 483 ntBASIC7.08□□□□□ -1.28
USP11P51784 FNDC3CP-201ENST00000420795 1155 ntBASIC7.08□□□□□ -1.28
USP11P51784 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.08□□□□□ -1.28
USP11P51784 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.08□□□□□ -1.28
USP11P51784 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.08□□□□□ -1.28
USP11P51784 RPL5P7-201ENST00000444235 813 ntBASIC7.08□□□□□ -1.28
USP11P51784 USP9YP29-201ENST00000445112 563 ntBASIC7.08□□□□□ -1.28
USP11P51784 TPT1P14-201ENST00000448018 505 ntBASIC7.08□□□□□ -1.28
USP11P51784 XKRYP5-201ENST00000449659 483 ntBASIC7.08□□□□□ -1.28
USP11P51784 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USP11P51784 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC7.08□□□□□ -1.28
USP11P51784 AP002453.1-201ENST00000492327 668 ntBASIC7.08□□□□□ -1.28
USP11P51784 MYL12BP2-201ENST00000503948 512 ntBASIC7.08□□□□□ -1.28
USP11P51784 AC122718.2-201ENST00000505325 591 ntBASIC7.08□□□□□ -1.28
USP11P51784 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.08□□□□□ -1.28
USP11P51784 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.08□□□□□ -1.28
USP11P51784 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.08□□□□□ -1.28
USP11P51784 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms