Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RN7SKP125-201ENST00000410481 302 ntBASIC5.43□□□□□ -1.54
LHX1P48742 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.43□□□□□ -1.54
LHX1P48742 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.43□□□□□ -1.54
LHX1P48742 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.43□□□□□ -1.54
LHX1P48742 RBMY2QP-201ENST00000429799 1147 ntBASIC5.43□□□□□ -1.54
LHX1P48742 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.43□□□□□ -1.54
LHX1P48742 PSMD10P3-201ENST00000437000 448 ntBASIC5.43□□□□□ -1.54
LHX1P48742 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.43□□□□□ -1.54
LHX1P48742 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.43□□□□□ -1.54
LHX1P48742 AL354714.3-201ENST00000447284 493 ntBASIC5.43□□□□□ -1.54
LHX1P48742 CBX1P2-201ENST00000453841 458 ntBASIC5.43□□□□□ -1.54
LHX1P48742 TPRKBP1-201ENST00000456243 481 ntBASIC5.43□□□□□ -1.54
LHX1P48742 NDUFB5P1-201ENST00000508134 564 ntBASIC5.43□□□□□ -1.54
LHX1P48742 AC016559.2-201ENST00000510759 359 ntBASIC5.43□□□□□ -1.54
LHX1P48742 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.43□□□□□ -1.54
LHX1P48742 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.43□□□□□ -1.54
LHX1P48742 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.43□□□□□ -1.54
LHX1P48742 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.43□□□□□ -1.54
LHX1P48742 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LHX1P48742 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.43□□□□□ -1.54
LHX1P48742 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.43□□□□□ -1.54
LHX1P48742 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.43□□□□□ -1.54
LHX1P48742 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.43□□□□□ -1.54
LHX1P48742 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.43□□□□□ -1.54
LHX1P48742 AC133644.2-201ENST00000608142 540 ntBASIC5.43□□□□□ -1.54
LHX1P48742 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.43□□□□□ -1.54
LHX1P48742 RNA5SP439-201ENST00000617595 124 ntBASIC5.43□□□□□ -1.54
LHX1P48742 AC091905.4-201ENST00000623432 202 ntBASIC5.43□□□□□ -1.54
LHX1P48742 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LHX1P48742 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LHX1P48742 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
LHX1P48742 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LHX1P48742 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LHX1P48742 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
LHX1P48742 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.42□□□□□ -1.54
LHX1P48742 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.42□□□□□ -1.54
LHX1P48742 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LHX1P48742 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LHX1P48742 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LHX1P48742 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.42□□□□□ -1.54
LHX1P48742 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.42□□□□□ -1.54
LHX1P48742 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.42□□□□□ -1.54
LHX1P48742 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.42□□□□□ -1.54
LHX1P48742 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LHX1P48742 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LHX1P48742 SNORA2.3-201ENST00000383920 135 ntBASIC5.42□□□□□ -1.54
LHX1P48742 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LHX1P48742 NPM1P22-201ENST00000427761 952 ntBASIC5.42□□□□□ -1.54
LHX1P48742 COX6CP13-201ENST00000428703 226 ntBASIC5.42□□□□□ -1.54
LHX1P48742 AL606490.8-201ENST00000441624 319 ntBASIC5.42□□□□□ -1.54
LHX1P48742 AC004980.3-201ENST00000447046 365 ntBASIC5.42□□□□□ -1.54
LHX1P48742 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LHX1P48742 AC105918.1-201ENST00000474399 838 ntBASIC5.42□□□□□ -1.54
LHX1P48742 RN7SL826P-201ENST00000479724 288 ntBASIC5.42□□□□□ -1.54
LHX1P48742 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.42□□□□□ -1.54
LHX1P48742 RPSAP51-201ENST00000497462 645 ntBASIC5.42□□□□□ -1.54
LHX1P48742 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.42□□□□□ -1.54
LHX1P48742 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.42□□□□□ -1.54
LHX1P48742 RNU6-319P-201ENST00000516025 108 ntBASIC5.42□□□□□ -1.54
LHX1P48742 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.42□□□□□ -1.54
LHX1P48742 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.42□□□□□ -1.54
LHX1P48742 AC027369.5-201ENST00000533838 755 ntBASIC5.42□□□□□ -1.54
LHX1P48742 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LHX1P48742 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.42□□□□□ -1.54
LHX1P48742 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.42□□□□□ -1.54
LHX1P48742 AC016839.1-201ENST00000578162 867 ntBASIC5.42□□□□□ -1.54
LHX1P48742 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.42□□□□□ -1.54
LHX1P48742 AL627230.1-201ENST00000613077 211 ntBASIC5.42□□□□□ -1.54
LHX1P48742 AL591926.8-201ENST00000616876 211 ntBASIC5.42□□□□□ -1.54
LHX1P48742 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.42□□□□□ -1.54
LHX1P48742 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.42□□□□□ -1.54
LHX1P48742 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.42□□□□□ -1.54
LHX1P48742 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LHX1P48742 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.42□□□□□ -1.54
LHX1P48742 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LHX1P48742 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LHX1P48742 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LHX1P48742 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LHX1P48742 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LHX1P48742 AC007996.1-201ENST00000620414 2821 ntBASIC5.42□□□□□ -1.54
LHX1P48742 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LHX1P48742 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LHX1P48742 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LHX1P48742 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.41□□□□□ -1.54
LHX1P48742 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.41□□□□□ -1.54
LHX1P48742 AC010266.2-201ENST00000564741 3255 ntBASIC5.41□□□□□ -1.54
LHX1P48742 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.41□□□□□ -1.54
LHX1P48742 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LHX1P48742 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LHX1P48742 AL109941.1-201ENST00000401925 229 ntBASIC5.41□□□□□ -1.54
LHX1P48742 AC016769.2-201ENST00000414815 475 ntBASIC5.41□□□□□ -1.54
LHX1P48742 PCNPP4-201ENST00000414817 517 ntBASIC5.41□□□□□ -1.54
LHX1P48742 AL512504.1-201ENST00000415494 778 ntBASIC5.41□□□□□ -1.54
LHX1P48742 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LHX1P48742 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
LHX1P48742 RPL12P3-201ENST00000440080 396 ntBASIC5.41□□□□□ -1.54
LHX1P48742 RPL34P20-201ENST00000442771 351 ntBASIC5.41□□□□□ -1.54
LHX1P48742 OR7E125P-201ENST00000443450 846 ntBASIC5.41□□□□□ -1.54
LHX1P48742 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.41□□□□□ -1.54
LHX1P48742 AC091180.1-201ENST00000462104 372 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms