Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GABRA4P48169 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.79□□□□□ -1.64
GABRA4P48169 TCP1P3-201ENST00000414406 1498 ntBASIC4.79□□□□□ -1.64
GABRA4P48169 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
GABRA4P48169 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.79□□□□□ -1.64
GABRA4P48169 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
GABRA4P48169 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GABRA4P48169 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GABRA4P48169 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GABRA4P48169 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
GABRA4P48169 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.79□□□□□ -1.64
GABRA4P48169 AC073429.2-201ENST00000569694 1444 ntBASIC4.79□□□□□ -1.64
GABRA4P48169 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GABRA4P48169 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.78□□□□□ -1.64
GABRA4P48169 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
GABRA4P48169 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GABRA4P48169 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
GABRA4P48169 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.78□□□□□ -1.64
GABRA4P48169 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
GABRA4P48169 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GABRA4P48169 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GABRA4P48169 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GABRA4P48169 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GABRA4P48169 RN7SKP149-201ENST00000363008 344 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 AL035079.1-201ENST00000405210 287 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GABRA4P48169 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.78□□□□□ -1.64
GABRA4P48169 COX6B1P1-201ENST00000415962 213 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 AF186996.5-201ENST00000418098 904 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 AC104837.2-201ENST00000427236 424 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 AL136231.1-201ENST00000429407 730 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.78□□□□□ -1.64
GABRA4P48169 AL450023.3-201ENST00000440592 271 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 AL137845.2-201ENST00000444292 988 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.78□□□□□ -1.64
GABRA4P48169 OR52E3P-201ENST00000452083 936 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 AC093890.1-201ENST00000502554 540 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.78□□□□□ -1.64
GABRA4P48169 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.78□□□□□ -1.64
GABRA4P48169 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.78□□□□□ -1.64
GABRA4P48169 RNU6-513P-201ENST00000516104 104 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.78□□□□□ -1.64
GABRA4P48169 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.78□□□□□ -1.64
GABRA4P48169 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.78□□□□□ -1.64
GABRA4P48169 AL358913.1-201ENST00000554342 121 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 AC009117.1-201ENST00000563948 554 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 MIR3934-201ENST00000579806 107 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 AP005262.1-201ENST00000582646 997 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.78□□□□□ -1.64
GABRA4P48169 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.78□□□□□ -1.64
GABRA4P48169 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.78□□□□□ -1.64
GABRA4P48169 AC005084.1-201ENST00000605160 304 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.78□□□□□ -1.64
GABRA4P48169 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 AC091953.3-201ENST00000623220 236 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 AP001784.1-201ENST00000624107 428 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.78□□□□□ -1.64
GABRA4P48169 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
GABRA4P48169 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
GABRA4P48169 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GABRA4P48169 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GABRA4P48169 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.78□□□□□ -1.64
GABRA4P48169 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GABRA4P48169 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GABRA4P48169 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GABRA4P48169 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GABRA4P48169 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
GABRA4P48169 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GABRA4P48169 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.77□□□□□ -1.65
GABRA4P48169 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GABRA4P48169 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.77□□□□□ -1.65
GABRA4P48169 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
GABRA4P48169 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.77□□□□□ -1.65
GABRA4P48169 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
GABRA4P48169 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GABRA4P48169 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
GABRA4P48169 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.77□□□□□ -1.65
GABRA4P48169 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
GABRA4P48169 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GABRA4P48169 RN7SKP74-201ENST00000362849 309 ntBASIC4.77□□□□□ -1.65
GABRA4P48169 RNA5SP87-201ENST00000384155 118 ntBASIC4.77□□□□□ -1.65
GABRA4P48169 Z97832.1-201ENST00000402490 328 ntBASIC4.77□□□□□ -1.65
GABRA4P48169 COX5BP7-201ENST00000414780 274 ntBASIC4.77□□□□□ -1.65
GABRA4P48169 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.77□□□□□ -1.65
GABRA4P48169 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.77□□□□□ -1.65
GABRA4P48169 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.77□□□□□ -1.65
GABRA4P48169 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.77□□□□□ -1.65
GABRA4P48169 AC093414.1-201ENST00000434712 514 ntBASIC4.77□□□□□ -1.65
GABRA4P48169 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.77□□□□□ -1.65
GABRA4P48169 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.77□□□□□ -1.65
GABRA4P48169 HMGB1P4-201ENST00000455362 567 ntBASIC4.77□□□□□ -1.65
GABRA4P48169 RPS17P2-201ENST00000461663 408 ntBASIC4.77□□□□□ -1.65
GABRA4P48169 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GABRA4P48169 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.77□□□□□ -1.65
GABRA4P48169 RNA5SP392-201ENST00000516905 112 ntBASIC4.77□□□□□ -1.65
GABRA4P48169 RNA5SP230-201ENST00000517039 122 ntBASIC4.77□□□□□ -1.65
GABRA4P48169 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.77□□□□□ -1.65
GABRA4P48169 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GABRA4P48169 PCNPP1-201ENST00000552501 511 ntBASIC4.77□□□□□ -1.65
GABRA4P48169 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms