Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.75□□□□□ -1.65
RFC3P40938 AC234775.3-201ENST00000564612 656 ntBASIC4.75□□□□□ -1.65
RFC3P40938 AC127024.5-201ENST00000580085 462 ntBASIC4.75□□□□□ -1.65
RFC3P40938 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.75□□□□□ -1.65
RFC3P40938 AC087468.1-201ENST00000604365 630 ntBASIC4.75□□□□□ -1.65
RFC3P40938 AL451049.1-201ENST00000608672 497 ntBASIC4.75□□□□□ -1.65
RFC3P40938 AC116651.1-201ENST00000609724 556 ntBASIC4.75□□□□□ -1.65
RFC3P40938 AL136295.6-201ENST00000610486 658 ntBASIC4.75□□□□□ -1.65
RFC3P40938 AL445528.2-201ENST00000620582 470 ntBASIC4.75□□□□□ -1.65
RFC3P40938 uc_338.7-201ENST00000621834 124 ntBASIC4.75□□□□□ -1.65
RFC3P40938 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.75□□□□□ -1.65
RFC3P40938 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.75□□□□□ -1.65
RFC3P40938 AC245100.2-201ENST00000454544 1679 ntBASIC4.75□□□□□ -1.65
RFC3P40938 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFC3P40938 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RFC3P40938 AC004817.4-201ENST00000602396 3625 ntBASIC4.75□□□□□ -1.65
RFC3P40938 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.75□□□□□ -1.65
RFC3P40938 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.75□□□□□ -1.65
RFC3P40938 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFC3P40938 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RFC3P40938 AC000374.1-201ENST00000434698 1745 ntBASIC4.75□□□□□ -1.65
RFC3P40938 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFC3P40938 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RFC3P40938 AC011447.7-201ENST00000624228 1590 ntBASIC4.74□□□□□ -1.65
RFC3P40938 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
RFC3P40938 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFC3P40938 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFC3P40938 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.74□□□□□ -1.65
RFC3P40938 AC006206.1-201ENST00000544842 3387 ntBASIC4.74□□□□□ -1.65
RFC3P40938 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFC3P40938 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.74□□□□□ -1.65
RFC3P40938 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFC3P40938 PANDAR-201ENST00000629595 1506 ntBASIC4.74□□□□□ -1.65
RFC3P40938 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFC3P40938 RNU4-44P-201ENST00000363050 141 ntBASIC4.74□□□□□ -1.65
RFC3P40938 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFC3P40938 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
RFC3P40938 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFC3P40938 UBBP2-201ENST00000376781 231 ntBASIC4.74□□□□□ -1.65
RFC3P40938 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFC3P40938 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.74□□□□□ -1.65
RFC3P40938 AL109941.1-201ENST00000401925 229 ntBASIC4.74□□□□□ -1.65
RFC3P40938 RPS26P13-201ENST00000419030 330 ntBASIC4.74□□□□□ -1.65
RFC3P40938 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.74□□□□□ -1.65
RFC3P40938 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.74□□□□□ -1.65
RFC3P40938 AL772161.1-201ENST00000439130 476 ntBASIC4.74□□□□□ -1.65
RFC3P40938 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.74□□□□□ -1.65
RFC3P40938 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.74□□□□□ -1.65
RFC3P40938 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.74□□□□□ -1.65
RFC3P40938 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.74□□□□□ -1.65
RFC3P40938 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.74□□□□□ -1.65
RFC3P40938 TRBV8-1-201ENST00000481590 279 ntBASIC4.74□□□□□ -1.65
RFC3P40938 AC231760.1-201ENST00000498002 260 ntBASIC4.74□□□□□ -1.65
RFC3P40938 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.74□□□□□ -1.65
RFC3P40938 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.74□□□□□ -1.65
RFC3P40938 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.74□□□□□ -1.65
RFC3P40938 EIF4A2P5-201ENST00000529914 499 ntBASIC4.74□□□□□ -1.65
RFC3P40938 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.74□□□□□ -1.65
RFC3P40938 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.74□□□□□ -1.65
RFC3P40938 AC011840.5-201ENST00000582125 771 ntBASIC4.74□□□□□ -1.65
RFC3P40938 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.74□□□□□ -1.65
RFC3P40938 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.74□□□□□ -1.65
RFC3P40938 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.74□□□□□ -1.65
RFC3P40938 AC093799.2-201ENST00000610062 578 ntBASIC4.74□□□□□ -1.65
RFC3P40938 AC096586.2-201ENST00000610260 441 ntBASIC4.74□□□□□ -1.65
RFC3P40938 EIF3FP1-201ENST00000613970 806 ntBASIC4.74□□□□□ -1.65
RFC3P40938 AP001784.1-201ENST00000624107 428 ntBASIC4.74□□□□□ -1.65
RFC3P40938 AL353662.3-201ENST00000625131 237 ntBASIC4.74□□□□□ -1.65
RFC3P40938 TMEM30CP-203ENST00000637814 1035 ntBASIC4.74□□□□□ -1.65
RFC3P40938 BTBD10P1-201ENST00000549824 1352 ntBASIC4.74□□□□□ -1.65
RFC3P40938 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
RFC3P40938 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RFC3P40938 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.74□□□□□ -1.65
RFC3P40938 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RFC3P40938 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFC3P40938 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFC3P40938 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RFC3P40938 AC112255.1-201ENST00000624070 2493 ntBASIC4.73□□□□□ -1.65
RFC3P40938 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
RFC3P40938 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.73□□□□□ -1.65
RFC3P40938 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.73□□□□□ -1.65
RFC3P40938 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RFC3P40938 RNA5SP90-201ENST00000364801 99 ntBASIC4.73□□□□□ -1.65
RFC3P40938 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFC3P40938 RNU2-22P-201ENST00000411266 212 ntBASIC4.73□□□□□ -1.65
RFC3P40938 GJA6P-201ENST00000415117 1042 ntBASIC4.73□□□□□ -1.65
RFC3P40938 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.73□□□□□ -1.65
RFC3P40938 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.73□□□□□ -1.65
RFC3P40938 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.73□□□□□ -1.65
RFC3P40938 VN1R54P-201ENST00000435210 1049 ntBASIC4.73□□□□□ -1.65
RFC3P40938 SUMO2P1-206ENST00000445436 284 ntBASIC4.73□□□□□ -1.65
RFC3P40938 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.73□□□□□ -1.65
RFC3P40938 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RFC3P40938 AC093890.1-201ENST00000502554 540 ntBASIC4.73□□□□□ -1.65
RFC3P40938 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.73□□□□□ -1.65
RFC3P40938 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.73□□□□□ -1.65
RFC3P40938 AP000676.2-201ENST00000529711 301 ntBASIC4.73□□□□□ -1.65
RFC3P40938 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.73□□□□□ -1.65
RFC3P40938 AC005000.1-201ENST00000536192 288 ntBASIC4.73□□□□□ -1.65
RFC3P40938 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms