Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AP002884.5-201ENST00000595053 1132 ntBASIC5.17□□□□□ -1.58
TRIM23P36406 AC118658.2-201ENST00000618697 459 ntBASIC5.17□□□□□ -1.58
TRIM23P36406 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
TRIM23P36406 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM23P36406 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM23P36406 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM23P36406 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM23P36406 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.17□□□□□ -1.58
TRIM23P36406 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM23P36406 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRIM23P36406 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
TRIM23P36406 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM23P36406 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM23P36406 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM23P36406 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM23P36406 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM23P36406 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM23P36406 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM23P36406 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM23P36406 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM23P36406 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM23P36406 RNU1-74P-201ENST00000384108 171 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 SEPT7P8-201ENST00000413308 775 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 AC009784.1-201ENST00000426484 460 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 PSMD10P3-201ENST00000437000 448 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 RPS29P10-201ENST00000439197 166 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 KNOP1P3-201ENST00000446933 426 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 NOP56P2-201ENST00000447491 769 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 TAAR4P-201ENST00000454843 1039 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM23P36406 RN7SL610P-201ENST00000463845 291 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM23P36406 RN7SL97P-201ENST00000486780 299 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM23P36406 RPS12P31-201ENST00000491419 398 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 AGGF1P3-201ENST00000493675 1213 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 AC231760.1-201ENST00000498002 260 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 NDUFA5P12-201ENST00000503796 343 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 RN7SKP66-201ENST00000516681 231 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 AP002981.1-201ENST00000517692 975 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM23P36406 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM23P36406 AC092490.3-201ENST00000545370 572 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 EIF1AXP2-201ENST00000555940 413 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM23P36406 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM23P36406 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM23P36406 AC010632.3-201ENST00000611377 369 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
TRIM23P36406 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM23P36406 AC000123.3-201ENST00000624029 4975 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM23P36406 AC083843.3-201ENST00000623679 2186 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM23P36406 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM23P36406 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM23P36406 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM23P36406 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM23P36406 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM23P36406 THAP12P4-201ENST00000528321 2266 ntBASIC5.16□□□□□ -1.58
TRIM23P36406 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM23P36406 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM23P36406 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.15□□□□□ -1.58
TRIM23P36406 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
TRIM23P36406 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM23P36406 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM23P36406 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM23P36406 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM23P36406 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM23P36406 OR9G4-201ENST00000302957 984 ntBASIC5.15□□□□□ -1.59
TRIM23P36406 RNU6-697P-201ENST00000363348 107 ntBASIC5.15□□□□□ -1.59
TRIM23P36406 AL672167.2-201ENST00000377164 879 ntBASIC5.15□□□□□ -1.59
TRIM23P36406 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TRIM23P36406 SNORA48.4-201ENST00000391089 134 ntBASIC5.15□□□□□ -1.59
TRIM23P36406 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM23P36406 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM23P36406 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM23P36406 RPL7AP49-201ENST00000429522 581 ntBASIC5.15□□□□□ -1.59
TRIM23P36406 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM23P36406 AL591438.1-201ENST00000433508 581 ntBASIC5.15□□□□□ -1.59
TRIM23P36406 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM23P36406 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM23P36406 AC090804.1-201ENST00000448870 490 ntBASIC5.15□□□□□ -1.59
TRIM23P36406 RPL7P41-201ENST00000485823 957 ntBASIC5.15□□□□□ -1.59
TRIM23P36406 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM23P36406 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM23P36406 EIF3KP3-201ENST00000514461 639 ntBASIC5.15□□□□□ -1.59
TRIM23P36406 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.15□□□□□ -1.59
TRIM23P36406 AC013701.1-201ENST00000522657 465 ntBASIC5.15□□□□□ -1.59
TRIM23P36406 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.15□□□□□ -1.59
TRIM23P36406 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM23P36406 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.15□□□□□ -1.59
TRIM23P36406 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
TRIM23P36406 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM23P36406 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM23P36406 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM23P36406 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM23P36406 AL008729.2-201ENST00000606393 473 ntBASIC5.15□□□□□ -1.59
TRIM23P36406 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms