Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HMGCLP35914 AC027228.2-201ENST00000567141 2154 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCLP35914 AC007342.9-201ENST00000623877 1385 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCLP35914 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCLP35914 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCLP35914 AC073136.1-201ENST00000449426 2884 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 RNU1-106P-201ENST00000384382 164 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 NPM1P40-201ENST00000412758 733 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 UBE2V2P1-201ENST00000434717 398 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 RPS29P9-201ENST00000440360 171 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 ARAFP2-201ENST00000440565 559 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 RPL7AP61-201ENST00000443410 636 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 CYCSP24-201ENST00000445119 316 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGCLP35914 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGCLP35914 COX6B1P5-201ENST00000509843 249 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 RFPL4AP5-201ENST00000514977 504 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCLP35914 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCLP35914 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCLP35914 NMNAT1P1-201ENST00000554095 876 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGCLP35914 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCLP35914 AC127024.5-201ENST00000580085 462 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGCLP35914 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.06□□□□□ -1.6
HMGCLP35914 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGCLP35914 AC105254.2-201ENST00000603636 436 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCLP35914 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCLP35914 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCLP35914 AC132825.8-201ENST00000640783 297 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 AC097461.1-201ENST00000568928 2821 ntBASIC5.06□□□□□ -1.6
HMGCLP35914 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
HMGCLP35914 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HMGCLP35914 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCLP35914 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HMGCLP35914 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCLP35914 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCLP35914 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HMGCLP35914 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCLP35914 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCLP35914 AC025574.1-201ENST00000554784 1653 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGCLP35914 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCLP35914 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCLP35914 ADAM5-202ENST00000399789 1942 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 HSPA8P18-201ENST00000439846 1928 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCLP35914 BTBD10P1-201ENST00000549824 1352 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCLP35914 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGCLP35914 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCLP35914 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCLP35914 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HMGCLP35914 ATP5HP3-201ENST00000396994 486 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 SNORA77-201ENST00000408716 125 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 Z68694.1-201ENST00000413929 841 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGCLP35914 YY1P1-201ENST00000427625 668 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 OR7E125P-201ENST00000443450 846 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 MYO5BP2-201ENST00000449815 1277 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGCLP35914 AC004815.1-201ENST00000484185 331 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGCLP35914 RN7SL244P-201ENST00000493405 297 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGCLP35914 ENPP7P11-201ENST00000505915 627 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGCLP35914 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGCLP35914 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGCLP35914 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGCLP35914 OR7E128P-201ENST00000532736 1024 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGCLP35914 MIR3691-201ENST00000578066 90 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 MIR4472-2-201ENST00000582069 67 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGCLP35914 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGCLP35914 AC016769.4-201ENST00000616893 535 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCLP35914 AC083843.2-201ENST00000568248 6253 ntBASIC5.05□□□□□ -1.6
HMGCLP35914 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGCLP35914 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HMGCLP35914 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGCLP35914 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
HMGCLP35914 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGCLP35914 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCLP35914 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HMGCLP35914 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGCLP35914 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGCLP35914 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGCLP35914 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGCLP35914 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGCLP35914 AC109780.1-201ENST00000451768 1344 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGCLP35914 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGCLP35914 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms