Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AL136131.1-201ENST00000406079 803 ntBASIC5.42□□□□□ -1.54
CASQ1P31415 HMGN1P20-201ENST00000411849 300 ntBASIC5.42□□□□□ -1.54
CASQ1P31415 OR2AT2P-201ENST00000413438 905 ntBASIC5.42□□□□□ -1.54
CASQ1P31415 AC099336.2-201ENST00000422457 254 ntBASIC5.42□□□□□ -1.54
CASQ1P31415 IPMKP1-201ENST00000425988 855 ntBASIC5.42□□□□□ -1.54
CASQ1P31415 AL158073.1-201ENST00000426848 1104 ntBASIC5.42□□□□□ -1.54
CASQ1P31415 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.42□□□□□ -1.54
CASQ1P31415 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CASQ1P31415 RPS29P10-201ENST00000439197 166 ntBASIC5.42□□□□□ -1.54
CASQ1P31415 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.42□□□□□ -1.54
CASQ1P31415 AC073109.1-201ENST00000445066 978 ntBASIC5.42□□□□□ -1.54
CASQ1P31415 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.42□□□□□ -1.54
CASQ1P31415 AP006222.1-205ENST00000450734 457 ntBASIC5.42□□□□□ -1.54
CASQ1P31415 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.42□□□□□ -1.54
CASQ1P31415 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.42□□□□□ -1.54
CASQ1P31415 AC099560.2-201ENST00000457554 255 ntBASIC5.42□□□□□ -1.54
CASQ1P31415 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.42□□□□□ -1.54
CASQ1P31415 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.42□□□□□ -1.54
CASQ1P31415 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CASQ1P31415 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.42□□□□□ -1.54
CASQ1P31415 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.42□□□□□ -1.54
CASQ1P31415 AC068446.3-201ENST00000555285 382 ntBASIC5.42□□□□□ -1.54
CASQ1P31415 AC107958.1-201ENST00000556576 290 ntBASIC5.42□□□□□ -1.54
CASQ1P31415 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.42□□□□□ -1.54
CASQ1P31415 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.42□□□□□ -1.54
CASQ1P31415 VN1R81P-201ENST00000602085 372 ntBASIC5.42□□□□□ -1.54
CASQ1P31415 AL158196.1-201ENST00000616786 434 ntBASIC5.42□□□□□ -1.54
CASQ1P31415 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.42□□□□□ -1.54
CASQ1P31415 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CASQ1P31415 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.42□□□□□ -1.54
CASQ1P31415 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CASQ1P31415 AL121950.1-201ENST00000624993 2077 ntBASIC5.41□□□□□ -1.54
CASQ1P31415 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CASQ1P31415 MAPK10-320ENST00000641462 6696 ntBASIC5.41□□□□□ -1.54
CASQ1P31415 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CASQ1P31415 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CASQ1P31415 OR10J6P-201ENST00000289731 930 ntBASIC5.41□□□□□ -1.54
CASQ1P31415 MIR365B-201ENST00000362317 111 ntBASIC5.41□□□□□ -1.54
CASQ1P31415 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CASQ1P31415 SNORA2.3-201ENST00000383920 135 ntBASIC5.41□□□□□ -1.54
CASQ1P31415 MT-RNR1-201ENST00000389680 954 ntBASIC5.41□□□□□ -1.54
CASQ1P31415 QRSL1P2-201ENST00000418582 964 ntBASIC5.41□□□□□ -1.54
CASQ1P31415 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.41□□□□□ -1.54
CASQ1P31415 EIF4HP2-201ENST00000424380 563 ntBASIC5.41□□□□□ -1.54
CASQ1P31415 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.41□□□□□ -1.54
CASQ1P31415 NMNAT1P2-201ENST00000435192 860 ntBASIC5.41□□□□□ -1.54
CASQ1P31415 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.41□□□□□ -1.54
CASQ1P31415 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.41□□□□□ -1.54
CASQ1P31415 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.41□□□□□ -1.54
CASQ1P31415 NDUFB4P12-201ENST00000513465 390 ntBASIC5.41□□□□□ -1.54
CASQ1P31415 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.41□□□□□ -1.54
CASQ1P31415 NRBF2P4-201ENST00000520874 850 ntBASIC5.41□□□□□ -1.54
CASQ1P31415 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.41□□□□□ -1.54
CASQ1P31415 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.41□□□□□ -1.54
CASQ1P31415 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.41□□□□□ -1.54
CASQ1P31415 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.41□□□□□ -1.54
CASQ1P31415 IMMP1LP1-201ENST00000605170 488 ntBASIC5.41□□□□□ -1.54
CASQ1P31415 AL512413.1-201ENST00000606489 382 ntBASIC5.41□□□□□ -1.54
CASQ1P31415 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.41□□□□□ -1.54
CASQ1P31415 AC008115.3-201ENST00000614874 549 ntBASIC5.41□□□□□ -1.54
CASQ1P31415 CU639417.4-201ENST00000623928 207 ntBASIC5.41□□□□□ -1.54
CASQ1P31415 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.41□□□□□ -1.54
CASQ1P31415 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CASQ1P31415 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CASQ1P31415 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CASQ1P31415 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.41□□□□□ -1.54
CASQ1P31415 AC092747.4-201ENST00000620519 1861 ntBASIC5.41□□□□□ -1.54
CASQ1P31415 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.41□□□□□ -1.54
CASQ1P31415 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CASQ1P31415 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CASQ1P31415 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CASQ1P31415 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CASQ1P31415 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CASQ1P31415 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.4□□□□□ -1.54
CASQ1P31415 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CASQ1P31415 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CASQ1P31415 MIR133B-201ENST00000362210 119 ntBASIC5.4□□□□□ -1.54
CASQ1P31415 RNU6-984P-201ENST00000363236 109 ntBASIC5.4□□□□□ -1.54
CASQ1P31415 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CASQ1P31415 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CASQ1P31415 AL512422.1-201ENST00000407033 553 ntBASIC5.4□□□□□ -1.54
CASQ1P31415 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.4□□□□□ -1.54
CASQ1P31415 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.4□□□□□ -1.54
CASQ1P31415 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.4□□□□□ -1.54
CASQ1P31415 FMO7P-201ENST00000436045 768 ntBASIC5.4□□□□□ -1.54
CASQ1P31415 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.4□□□□□ -1.54
CASQ1P31415 Z84478.1-201ENST00000438230 1219 ntBASIC5.4□□□□□ -1.54
CASQ1P31415 RPS26P2-201ENST00000440331 348 ntBASIC5.4□□□□□ -1.54
CASQ1P31415 TXNP5-201ENST00000441043 315 ntBASIC5.4□□□□□ -1.54
CASQ1P31415 CASP3P1-201ENST00000446037 609 ntBASIC5.4□□□□□ -1.54
CASQ1P31415 SIAH1P1-201ENST00000479411 923 ntBASIC5.4□□□□□ -1.54
CASQ1P31415 RN7SL214P-201ENST00000487317 265 ntBASIC5.4□□□□□ -1.54
CASQ1P31415 AC122718.2-201ENST00000505325 591 ntBASIC5.4□□□□□ -1.54
CASQ1P31415 AC109481.1-201ENST00000509173 282 ntBASIC5.4□□□□□ -1.54
CASQ1P31415 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CASQ1P31415 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.4□□□□□ -1.54
CASQ1P31415 AL512310.9-201ENST00000553311 948 ntBASIC5.4□□□□□ -1.54
CASQ1P31415 AC002310.3-201ENST00000569728 723 ntBASIC5.4□□□□□ -1.54
CASQ1P31415 OR1F2P-201ENST00000570470 933 ntBASIC5.4□□□□□ -1.54
CASQ1P31415 AC134669.1-201ENST00000581275 672 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms