Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 HSPA8P18-201ENST00000439846 1928 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DMBP28068 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DMBP28068 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DMBP28068 U3.3-201ENST00000362986 216 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 SNORA74A-201ENST00000364089 198 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 SPTLC1P2-201ENST00000407089 121 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 SNORA11B-201ENST00000408175 129 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 AC013429.2-201ENST00000418798 781 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 AC091180.1-201ENST00000462104 372 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 CREM-220ENST00000463314 964 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 AC005412.2-201ENST00000492004 341 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 AC015864.1-201ENST00000496512 544 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 AC112184.1-201ENST00000505179 312 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 PGAM1P13-201ENST00000507497 754 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 AC012400.1-201ENST00000518452 381 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 AP006245.2-201ENST00000522004 300 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 ASB8-215ENST00000540782 659 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 HAUS8P1-201ENST00000549005 542 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DMBP28068 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DMBP28068 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DMBP28068 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DMBP28068 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 RN7SL435P-201ENST00000584418 282 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 MIR6719-201ENST00000622428 87 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 MTCO1P15-201ENST00000529569 1526 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DMBP28068 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DMBP28068 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 AL672167.1-204ENST00000641875 3017 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DMBP28068 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DMBP28068 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 AC093909.5-201ENST00000621839 1799 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DMBP28068 MTHFD2P5-201ENST00000320415 844 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DMBP28068 MRRF-207ENST00000373729 870 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 SNORA67-201ENST00000384423 137 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 AL078599.1-201ENST00000402075 293 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 AL139148.1-201ENST00000427122 680 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 NANOGP4-201ENST00000427230 913 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 AC009238.2-201ENST00000431026 355 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 FAR2P1-206ENST00000449736 709 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 RPS6P2-201ENST00000454208 705 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 AC079841.1-201ENST00000481228 950 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 RPS21P4-201ENST00000487122 248 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 AC072052.1-201ENST00000496556 306 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 HMGB1P19-201ENST00000517578 577 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 BNIP3P1-201ENST00000547295 580 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 AC044860.2-201ENST00000561005 179 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 MIR4443-201ENST00000585052 53 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DMBP28068 AL008729.2-201ENST00000606393 473 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 AL021707.7-201ENST00000607991 416 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 AP005432.2-201ENST00000608162 586 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 AL121612.2-201ENST00000612261 482 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 OR8G7P-201ENST00000616658 848 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 AC016769.4-201ENST00000616893 535 ntBASIC3.87□□□□□ -1.79
HLA-DMBP28068 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms