Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD40P25942 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CD40P25942 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
CD40P25942 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CD40P25942 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CD40P25942 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
CD40P25942 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD40P25942 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD40P25942 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD40P25942 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CD40P25942 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD40P25942 HSPA8P17-201ENST00000427029 1382 ntBASIC5.6□□□□□ -1.51
CD40P25942 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CD40P25942 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD40P25942 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CD40P25942 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CD40P25942 U3.4-201ENST00000363352 213 ntBASIC5.6□□□□□ -1.51
CD40P25942 SNORD116-23-201ENST00000384645 92 ntBASIC5.6□□□□□ -1.51
CD40P25942 MIR621-201ENST00000384919 96 ntBASIC5.6□□□□□ -1.51
CD40P25942 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CD40P25942 VN1R12P-201ENST00000403778 876 ntBASIC5.6□□□□□ -1.51
CD40P25942 AL139098.1-201ENST00000407291 389 ntBASIC5.6□□□□□ -1.51
CD40P25942 MIR1275-201ENST00000408770 80 ntBASIC5.6□□□□□ -1.51
CD40P25942 RNU6-272P-201ENST00000411028 104 ntBASIC5.6□□□□□ -1.51
CD40P25942 PIGPP2-201ENST00000411569 458 ntBASIC5.6□□□□□ -1.51
CD40P25942 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.6□□□□□ -1.51
CD40P25942 AL713922.1-201ENST00000416477 747 ntBASIC5.6□□□□□ -1.51
CD40P25942 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.6□□□□□ -1.51
CD40P25942 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.6□□□□□ -1.51
CD40P25942 AC099782.1-201ENST00000425889 474 ntBASIC5.6□□□□□ -1.51
CD40P25942 MTCO3P30-201ENST00000426425 670 ntBASIC5.6□□□□□ -1.51
CD40P25942 AL513175.1-201ENST00000431492 780 ntBASIC5.6□□□□□ -1.51
CD40P25942 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CD40P25942 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.6□□□□□ -1.51
CD40P25942 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD40P25942 BZW1P1-201ENST00000454901 1240 ntBASIC5.6□□□□□ -1.51
CD40P25942 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.6□□□□□ -1.51
CD40P25942 RPL23AP64-201ENST00000469465 435 ntBASIC5.6□□□□□ -1.51
CD40P25942 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
CD40P25942 GM2AP2-201ENST00000491764 562 ntBASIC5.6□□□□□ -1.51
CD40P25942 RN7SL362P-201ENST00000494228 267 ntBASIC5.6□□□□□ -1.51
CD40P25942 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.6□□□□□ -1.51
CD40P25942 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CD40P25942 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.6□□□□□ -1.51
CD40P25942 AC112484.3-201ENST00000505910 329 ntBASIC5.6□□□□□ -1.51
CD40P25942 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.6□□□□□ -1.51
CD40P25942 AC008494.2-201ENST00000514544 370 ntBASIC5.6□□□□□ -1.51
CD40P25942 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.6□□□□□ -1.51
CD40P25942 IGLV3-6-201ENST00000523937 250 ntBASIC5.6□□□□□ -1.51
CD40P25942 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.6□□□□□ -1.51
CD40P25942 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.6□□□□□ -1.51
CD40P25942 LINC00556-201ENST00000569603 412 ntBASIC5.6□□□□□ -1.51
CD40P25942 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CD40P25942 MIR4433B-201ENST00000581329 102 ntBASIC5.6□□□□□ -1.51
CD40P25942 MIR4271-201ENST00000582451 67 ntBASIC5.6□□□□□ -1.51
CD40P25942 MIR3611-201ENST00000584484 83 ntBASIC5.6□□□□□ -1.51
CD40P25942 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.6□□□□□ -1.51
CD40P25942 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.6□□□□□ -1.51
CD40P25942 AL078623.1-201ENST00000602702 907 ntBASIC5.6□□□□□ -1.51
CD40P25942 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.6□□□□□ -1.51
CD40P25942 AC007204.2-201ENST00000615022 616 ntBASIC5.6□□□□□ -1.51
CD40P25942 MIR6721-201ENST00000617181 87 ntBASIC5.6□□□□□ -1.51
CD40P25942 MIR6811-201ENST00000620409 58 ntBASIC5.6□□□□□ -1.51
CD40P25942 AC009878.1-201ENST00000621819 340 ntBASIC5.6□□□□□ -1.51
CD40P25942 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.6□□□□□ -1.51
CD40P25942 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.6□□□□□ -1.51
CD40P25942 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.6□□□□□ -1.51
CD40P25942 CDRT1-208ENST00000630868 794 ntBASIC5.6□□□□□ -1.51
CD40P25942 AC111152.1-202ENST00000635848 339 ntBASIC5.6□□□□□ -1.51
CD40P25942 MKKS-204ENST00000639674 192 ntBASIC5.6□□□□□ -1.51
CD40P25942 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
CD40P25942 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CD40P25942 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
CD40P25942 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD40P25942 AL022323.4-201ENST00000623980 13120 ntBASIC5.6□□□□□ -1.51
CD40P25942 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD40P25942 SALL4P7-201ENST00000555779 3120 ntBASIC5.6□□□□□ -1.51
CD40P25942 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CD40P25942 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CD40P25942 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC5.6□□□□□ -1.51
CD40P25942 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CD40P25942 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD40P25942 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CD40P25942 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.59□□□□□ -1.51
CD40P25942 AC062022.1-201ENST00000451026 1684 ntBASIC5.59□□□□□ -1.51
CD40P25942 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.59□□□□□ -1.51
CD40P25942 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CD40P25942 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
CD40P25942 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CD40P25942 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.59□□□□□ -1.51
CD40P25942 AC096656.1-201ENST00000623826 1364 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms