Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
UBCP0CG48 AC134669.1-201ENST00000581275 672 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.52□□□□□ -1.69
UBCP0CG48 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.52□□□□□ -1.69
UBCP0CG48 AC010615.3-201ENST00000597319 394 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 AL499605.1-201ENST00000604628 403 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 TAS2R6P-201ENST00000605022 826 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.52□□□□□ -1.69
UBCP0CG48 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.52□□□□□ -1.69
UBCP0CG48 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.52□□□□□ -1.69
UBCP0CG48 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.52□□□□□ -1.69
UBCP0CG48 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.52□□□□□ -1.69
UBCP0CG48 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
UBCP0CG48 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
UBCP0CG48 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBCP0CG48 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.52□□□□□ -1.69
UBCP0CG48 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBCP0CG48 AC091305.2-201ENST00000624049 1576 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.52□□□□□ -1.69
UBCP0CG48 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBCP0CG48 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBCP0CG48 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.52□□□□□ -1.69
UBCP0CG48 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBCP0CG48 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.51□□□□□ -1.69
UBCP0CG48 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
UBCP0CG48 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBCP0CG48 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
UBCP0CG48 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
UBCP0CG48 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UBCP0CG48 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
UBCP0CG48 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
UBCP0CG48 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
UBCP0CG48 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UBCP0CG48 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
UBCP0CG48 RNA5SP90-201ENST00000364801 99 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
UBCP0CG48 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.51□□□□□ -1.69
UBCP0CG48 RN7SKP199-201ENST00000410325 305 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.51□□□□□ -1.69
UBCP0CG48 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.51□□□□□ -1.69
UBCP0CG48 MTND4LP13-201ENST00000425022 298 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 COX6CP13-201ENST00000428703 226 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.51□□□□□ -1.69
UBCP0CG48 HMGN1P2-201ENST00000445197 310 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AL035551.1-201ENST00000446931 348 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AC004980.3-201ENST00000447046 365 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.51□□□□□ -1.69
UBCP0CG48 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UBCP0CG48 AL133445.1-201ENST00000467051 452 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AC100832.1-201ENST00000471945 383 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AC105918.1-201ENST00000474399 838 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AC037198.2-201ENST00000478845 733 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AC005412.2-201ENST00000492004 341 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 ARL4AP1-201ENST00000503220 705 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
UBCP0CG48 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBCP0CG48 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.51□□□□□ -1.69
UBCP0CG48 SNORD46.2-201ENST00000516021 102 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 snoU109.6-201ENST00000516831 118 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.51□□□□□ -1.69
UBCP0CG48 AC112191.2-201ENST00000522428 333 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.51□□□□□ -1.69
UBCP0CG48 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.51□□□□□ -1.69
UBCP0CG48 AC107918.3-201ENST00000533272 382 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
UBCP0CG48 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.51□□□□□ -1.69
UBCP0CG48 AC115989.2-201ENST00000578640 563 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.51□□□□□ -1.69
UBCP0CG48 AC027243.2-201ENST00000602530 724 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.51□□□□□ -1.69
UBCP0CG48 FO393422.1-201ENST00000603908 708 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.51□□□□□ -1.69
UBCP0CG48 AC010245.2-201ENST00000606908 1167 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AL592494.3-201ENST00000609485 464 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AP005131.7-201ENST00000610087 611 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AC015922.4-201ENST00000612568 690 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
UBCP0CG48 AP002967.1-201ENST00000624203 539 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AL691477.1-201ENST00000624398 162 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 AC135068.12-201ENST00000637370 931 ntBASIC4.51□□□□□ -1.69
UBCP0CG48 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBCP0CG48 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBCP0CG48 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBCP0CG48 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
UBCP0CG48 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBCP0CG48 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UBCP0CG48 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.5□□□□□ -1.69
UBCP0CG48 AL121950.1-201ENST00000624993 2077 ntBASIC4.5□□□□□ -1.69
UBCP0CG48 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.5□□□□□ -1.69
UBCP0CG48 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.5□□□□□ -1.69
UBCP0CG48 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UBCP0CG48 AL356317.1-201ENST00000396110 1436 ntBASIC4.5□□□□□ -1.69
UBCP0CG48 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
UBCP0CG48 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.5□□□□□ -1.69
UBCP0CG48 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.5□□□□□ -1.69
UBCP0CG48 RNA5SP339-201ENST00000390987 122 ntBASIC4.5□□□□□ -1.69
UBCP0CG48 AL136131.1-201ENST00000406079 803 ntBASIC4.5□□□□□ -1.69
UBCP0CG48 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.5□□□□□ -1.69
UBCP0CG48 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.5□□□□□ -1.69
UBCP0CG48 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms