Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RN7SL51P-201ENST00000468230 285 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 STRADBP1-201ENST00000478954 1281 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
MT-ND1P03886 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.82□□□□□ -1.64
MT-ND1P03886 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.82□□□□□ -1.64
MT-ND1P03886 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.82□□□□□ -1.64
MT-ND1P03886 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.82□□□□□ -1.64
MT-ND1P03886 AC006427.1-201ENST00000514359 712 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.82□□□□□ -1.64
MT-ND1P03886 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.82□□□□□ -1.64
MT-ND1P03886 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
MT-ND1P03886 AP002373.2-201ENST00000541631 1060 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 AC008147.3-201ENST00000548666 354 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 AC067805.1-201ENST00000559344 470 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 AC084759.1-201ENST00000561168 290 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.82□□□□□ -1.64
MT-ND1P03886 AC018695.5-201ENST00000605872 315 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.82□□□□□ -1.64
MT-ND1P03886 AC000068.2-201ENST00000608816 460 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 AC019131.2-201ENST00000609071 870 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 AL133370.2-201ENST00000619934 439 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.82□□□□□ -1.64
MT-ND1P03886 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.82□□□□□ -1.64
MT-ND1P03886 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.82□□□□□ -1.64
MT-ND1P03886 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
MT-ND1P03886 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
MT-ND1P03886 UGT2B26P-201ENST00000508672 1613 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 AC110792.3-201ENST00000595906 1614 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MT-ND1P03886 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MT-ND1P03886 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MT-ND1P03886 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
MT-ND1P03886 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
MT-ND1P03886 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
MT-ND1P03886 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.81□□□□□ -1.64
MT-ND1P03886 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
MT-ND1P03886 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
MT-ND1P03886 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MT-ND1P03886 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.81□□□□□ -1.64
MT-ND1P03886 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MT-ND1P03886 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MT-ND1P03886 OR5T3-201ENST00000303059 1023 ntBASIC4.81□□□□□ -1.64
MT-ND1P03886 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MT-ND1P03886 RN7SKP97-201ENST00000410966 333 ntBASIC4.81□□□□□ -1.64
MT-ND1P03886 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.81□□□□□ -1.64
MT-ND1P03886 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.81□□□□□ -1.64
MT-ND1P03886 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.81□□□□□ -1.64
MT-ND1P03886 AL389925.1-201ENST00000432257 728 ntBASIC4.81□□□□□ -1.64
MT-ND1P03886 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.81□□□□□ -1.64
MT-ND1P03886 RAD1P2-201ENST00000446414 663 ntBASIC4.81□□□□□ -1.64
MT-ND1P03886 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.81□□□□□ -1.64
MT-ND1P03886 AC093166.2-201ENST00000455969 1017 ntBASIC4.81□□□□□ -1.64
MT-ND1P03886 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.81□□□□□ -1.64
MT-ND1P03886 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.81□□□□□ -1.64
MT-ND1P03886 OR52A4P-202ENST00000481634 799 ntBASIC4.81□□□□□ -1.64
MT-ND1P03886 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.81□□□□□ -1.64
MT-ND1P03886 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.81□□□□□ -1.64
MT-ND1P03886 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.81□□□□□ -1.64
MT-ND1P03886 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.81□□□□□ -1.64
MT-ND1P03886 AC112191.2-201ENST00000522428 333 ntBASIC4.81□□□□□ -1.64
MT-ND1P03886 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.81□□□□□ -1.64
MT-ND1P03886 BLZF2P-201ENST00000553776 1130 ntBASIC4.81□□□□□ -1.64
MT-ND1P03886 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.81□□□□□ -1.64
MT-ND1P03886 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.81□□□□□ -1.64
MT-ND1P03886 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MT-ND1P03886 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.81□□□□□ -1.64
MT-ND1P03886 FO393422.1-201ENST00000603908 708 ntBASIC4.81□□□□□ -1.64
MT-ND1P03886 AL021368.1-201ENST00000607490 540 ntBASIC4.81□□□□□ -1.64
MT-ND1P03886 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.81□□□□□ -1.64
MT-ND1P03886 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
MT-ND1P03886 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.81□□□□□ -1.64
MT-ND1P03886 AC118658.2-201ENST00000618697 459 ntBASIC4.81□□□□□ -1.64
MT-ND1P03886 AP001005.3-201ENST00000622049 129 ntBASIC4.81□□□□□ -1.64
MT-ND1P03886 AL118508.4-201ENST00000624142 1176 ntBASIC4.81□□□□□ -1.64
MT-ND1P03886 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.81□□□□□ -1.64
MT-ND1P03886 MIR1910-201ENST00000636955 80 ntBASIC4.81□□□□□ -1.64
MT-ND1P03886 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.81□□□□□ -1.64
MT-ND1P03886 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MT-ND1P03886 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.81□□□□□ -1.64
MT-ND1P03886 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
MT-ND1P03886 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
MT-ND1P03886 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
MT-ND1P03886 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
MT-ND1P03886 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.8□□□□□ -1.64
MT-ND1P03886 AL022322.2-201ENST00000624072 20397 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.8□□□□□ -1.64
MT-ND1P03886 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.8□□□□□ -1.64
MT-ND1P03886 SCARNA15-201ENST00000607520 4325 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.8□□□□□ -1.64
MT-ND1P03886 AC132825.1-201ENST00000463573 2247 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MT-ND1P03886 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MT-ND1P03886 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.8□□□□□ -1.64
MT-ND1P03886 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
MT-ND1P03886 RNU6-1251P-201ENST00000364502 107 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
MT-ND1P03886 SNORD65-201ENST00000391079 73 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 EI24P3-201ENST00000399046 1062 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 MIR1271-201ENST00000408537 86 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 SETP15-201ENST00000412724 337 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms