Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC013410.1-201ENST00000436223 1232 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 HMGB1P4-201ENST00000455362 567 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 RN7SL443P-201ENST00000464331 290 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC006967.1-201ENST00000467608 589 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC135999.1-201ENST00000478962 479 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC134669.1-201ENST00000581275 672 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC100767.2-201ENST00000604840 693 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 COX6CP4-201ENST00000605798 228 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AL133406.3-201ENST00000606817 541 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC010245.2-201ENST00000606908 1167 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 RNU6-84P-201ENST00000607737 102 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 RPSAP73-201ENST00000614820 330 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 WBP1LP8-201ENST00000617401 327 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC074101.1-201ENST00000637861 241 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 AC091305.2-201ENST00000624049 1576 ntBASIC4.27□□□□□ -1.73
HLA-DQB1P01920 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 RNA5SP335-201ENST00000363817 110 ntBASIC4.27□□□□□ -1.73
HLA-DQB1P01920 RNA5SP234-201ENST00000363916 119 ntBASIC4.27□□□□□ -1.73
HLA-DQB1P01920 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 MIR1182-201ENST00000408363 97 ntBASIC4.27□□□□□ -1.73
HLA-DQB1P01920 RANP7-201ENST00000418085 644 ntBASIC4.27□□□□□ -1.73
HLA-DQB1P01920 DYNLL1P7-201ENST00000429273 258 ntBASIC4.27□□□□□ -1.73
HLA-DQB1P01920 AL390119.1-201ENST00000440329 312 ntBASIC4.27□□□□□ -1.73
HLA-DQB1P01920 AC064862.4-201ENST00000442180 334 ntBASIC4.27□□□□□ -1.73
HLA-DQB1P01920 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 EIF1P7-201ENST00000487533 337 ntBASIC4.27□□□□□ -1.73
HLA-DQB1P01920 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 RPL10P14-201ENST00000565265 298 ntBASIC4.27□□□□□ -1.73
HLA-DQB1P01920 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 AC027243.2-201ENST00000602530 724 ntBASIC4.27□□□□□ -1.73
HLA-DQB1P01920 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 MIR6071-201ENST00000616741 78 ntBASIC4.27□□□□□ -1.73
HLA-DQB1P01920 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.27□□□□□ -1.73
HLA-DQB1P01920 AP003072.5-201ENST00000623872 773 ntBASIC4.27□□□□□ -1.73
HLA-DQB1P01920 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DQB1P01920 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HLA-DQB1P01920 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HLA-DQB1P01920 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
HLA-DQB1P01920 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DQB1P01920 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DQB1P01920 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB1P01920 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
HLA-DQB1P01920 DDX18P6-201ENST00000450119 1997 ntBASIC4.26□□□□□ -1.73
HLA-DQB1P01920 RN7SKP113-201ENST00000363891 295 ntBASIC4.26□□□□□ -1.73
HLA-DQB1P01920 BMS1P3-201ENST00000372011 932 ntBASIC4.26□□□□□ -1.73
HLA-DQB1P01920 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DQB1P01920 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DQB1P01920 AL050305.1-201ENST00000399993 1230 ntBASIC4.26□□□□□ -1.73
HLA-DQB1P01920 VN1R12P-201ENST00000403778 876 ntBASIC4.26□□□□□ -1.73
HLA-DQB1P01920 NUDT19P3-201ENST00000404698 555 ntBASIC4.26□□□□□ -1.73
HLA-DQB1P01920 SNORA81-201ENST00000408493 178 ntBASIC4.26□□□□□ -1.73
HLA-DQB1P01920 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DQB1P01920 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB1P01920 VN1R37P-201ENST00000419096 748 ntBASIC4.26□□□□□ -1.73
HLA-DQB1P01920 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms