Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.24□□□□□ -1.57
LDLRP01130 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.24□□□□□ -1.57
LDLRP01130 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LDLRP01130 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
LDLRP01130 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.23□□□□□ -1.57
LDLRP01130 YES1P1-201ENST00000418510 1628 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.23□□□□□ -1.57
LDLRP01130 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.23□□□□□ -1.57
LDLRP01130 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LDLRP01130 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.23□□□□□ -1.57
LDLRP01130 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LDLRP01130 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LDLRP01130 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LDLRP01130 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LDLRP01130 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LDLRP01130 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LDLRP01130 AL356057.1-202ENST00000402263 756 ntBASIC5.23□□□□□ -1.57
LDLRP01130 PPIAP9-201ENST00000403866 498 ntBASIC5.23□□□□□ -1.57
LDLRP01130 RN7SKP273-201ENST00000411392 314 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.23□□□□□ -1.57
LDLRP01130 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.23□□□□□ -1.57
LDLRP01130 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.23□□□□□ -1.57
LDLRP01130 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.23□□□□□ -1.57
LDLRP01130 RPL7AP49-201ENST00000429522 581 ntBASIC5.23□□□□□ -1.57
LDLRP01130 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.23□□□□□ -1.57
LDLRP01130 AL591438.1-201ENST00000433508 581 ntBASIC5.23□□□□□ -1.57
LDLRP01130 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.23□□□□□ -1.57
LDLRP01130 AL353718.1-201ENST00000451028 517 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AZGP1P2-201ENST00000454506 345 ntBASIC5.23□□□□□ -1.57
LDLRP01130 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.23□□□□□ -1.57
LDLRP01130 RN7SL583P-201ENST00000475692 287 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AP000797.2-201ENST00000475768 606 ntBASIC5.23□□□□□ -1.57
LDLRP01130 RPL7P39-201ENST00000481157 744 ntBASIC5.23□□□□□ -1.57
LDLRP01130 MTND3P24-201ENST00000506306 329 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AC008628.1-201ENST00000508663 265 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AC108157.1-201ENST00000510511 539 ntBASIC5.23□□□□□ -1.57
LDLRP01130 FABP5P6-201ENST00000510588 409 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AC016559.2-201ENST00000510759 359 ntBASIC5.23□□□□□ -1.57
LDLRP01130 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.23□□□□□ -1.57
LDLRP01130 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.23□□□□□ -1.57
LDLRP01130 AC067904.2-201ENST00000517322 1283 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AC092709.1-201ENST00000521355 1045 ntBASIC5.23□□□□□ -1.57
LDLRP01130 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.23□□□□□ -1.57
LDLRP01130 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.23□□□□□ -1.57
LDLRP01130 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.23□□□□□ -1.57
LDLRP01130 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.23□□□□□ -1.57
LDLRP01130 AC096996.1-201ENST00000563813 325 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AC015720.2-201ENST00000567709 334 ntBASIC5.23□□□□□ -1.57
LDLRP01130 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
LDLRP01130 RN7SL708P-201ENST00000580952 299 ntBASIC5.23□□□□□ -1.57
LDLRP01130 MIMT1-201ENST00000597105 1050 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AC009237.13-201ENST00000603193 276 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AL133247.2-201ENST00000603236 482 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.23□□□□□ -1.57
LDLRP01130 BNIP3P35-201ENST00000604530 490 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AC135803.1-201ENST00000608748 565 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AL121612.2-201ENST00000612261 482 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AC015922.4-201ENST00000612568 690 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AC090510.2-201ENST00000617465 629 ntBASIC5.23□□□□□ -1.57
LDLRP01130 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LDLRP01130 MIR8080-201ENST00000622224 89 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AC079298.2-201ENST00000623885 459 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AP003499.2-201ENST00000624100 483 ntBASIC5.23□□□□□ -1.57
LDLRP01130 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.23□□□□□ -1.57
LDLRP01130 AL590396.2-201ENST00000636511 1041 ntBASIC5.23□□□□□ -1.57
LDLRP01130 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LDLRP01130 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.23□□□□□ -1.57
LDLRP01130 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LDLRP01130 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LDLRP01130 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LDLRP01130 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
LDLRP01130 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
LDLRP01130 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
LDLRP01130 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.23□□□□□ -1.57
LDLRP01130 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LDLRP01130 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LDLRP01130 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LDLRP01130 AL034549.2-201ENST00000618285 3373 ntBASIC5.22□□□□□ -1.57
LDLRP01130 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LDLRP01130 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LDLRP01130 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.22□□□□□ -1.57
LDLRP01130 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.22□□□□□ -1.57
LDLRP01130 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LDLRP01130 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
LDLRP01130 OR1L6-202ENST00000373684 1044 ntBASIC5.22□□□□□ -1.57
LDLRP01130 RNU6-40P-201ENST00000384254 107 ntBASIC5.22□□□□□ -1.57
LDLRP01130 SNORD56.6-201ENST00000384569 71 ntBASIC5.22□□□□□ -1.57
LDLRP01130 SNORA48.4-201ENST00000391089 134 ntBASIC5.22□□□□□ -1.57
LDLRP01130 RN7SKP213-201ENST00000410746 298 ntBASIC5.22□□□□□ -1.57
LDLRP01130 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.22□□□□□ -1.57
LDLRP01130 RPL35AP24-201ENST00000413846 330 ntBASIC5.22□□□□□ -1.57
LDLRP01130 AL590762.4-201ENST00000425885 253 ntBASIC5.22□□□□□ -1.57
LDLRP01130 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.22□□□□□ -1.57
LDLRP01130 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.22□□□□□ -1.57
LDLRP01130 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.22□□□□□ -1.57
LDLRP01130 RPL21P133-201ENST00000443666 476 ntBASIC5.22□□□□□ -1.57
LDLRP01130 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LDLRP01130 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.22□□□□□ -1.57
LDLRP01130 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.22□□□□□ -1.57
LDLRP01130 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms