Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CNOT4O95628 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.83□□□□□ -1.48
CNOT4O95628 Y_RNA.465-201ENST00000384293 102 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 Y_RNA.516-201ENST00000384541 124 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 RNU6-225P-201ENST00000384613 103 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 SNORA40.2-201ENST00000390847 128 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 AL031577.2-201ENST00000404133 280 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.83□□□□□ -1.48
CNOT4O95628 RNA5SP115-201ENST00000411160 107 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 RNU4-74P-201ENST00000411280 161 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.83□□□□□ -1.48
CNOT4O95628 MTCO2P34-201ENST00000421994 607 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.83□□□□□ -1.48
CNOT4O95628 CENPIP1-201ENST00000425713 902 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 DPRXP1-201ENST00000426312 460 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.83□□□□□ -1.48
CNOT4O95628 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.83□□□□□ -1.48
CNOT4O95628 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.83□□□□□ -1.48
CNOT4O95628 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.83□□□□□ -1.48
CNOT4O95628 OR2B8P-201ENST00000432841 938 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 AC092106.2-201ENST00000436597 487 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 GTF2IP7-202ENST00000436677 309 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.83□□□□□ -1.48
CNOT4O95628 EIF5AP4-201ENST00000441206 465 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 FHP1-201ENST00000442741 703 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.83□□□□□ -1.48
CNOT4O95628 AC097359.1-201ENST00000447946 463 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 TPMTP4-201ENST00000450749 678 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 OR52E3P-201ENST00000452083 936 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.83□□□□□ -1.48
CNOT4O95628 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.83□□□□□ -1.48
CNOT4O95628 AC018638.3-201ENST00000461273 132 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.83□□□□□ -1.48
CNOT4O95628 RN7SL413P-201ENST00000482700 297 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 AC011825.1-201ENST00000484967 388 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 OR7E157P-201ENST00000494376 911 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 DSTNP2-201ENST00000504533 515 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.83□□□□□ -1.48
CNOT4O95628 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.83□□□□□ -1.48
CNOT4O95628 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.83□□□□□ -1.48
CNOT4O95628 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.83□□□□□ -1.48
CNOT4O95628 HIGD1AP10-201ENST00000527837 282 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.83□□□□□ -1.48
CNOT4O95628 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.83□□□□□ -1.48
CNOT4O95628 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.83□□□□□ -1.48
CNOT4O95628 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.83□□□□□ -1.48
CNOT4O95628 AC105227.2-201ENST00000615075 605 ntBASIC5.83□□□□□ -1.48
CNOT4O95628 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.83□□□□□ -1.48
CNOT4O95628 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.83□□□□□ -1.48
CNOT4O95628 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CNOT4O95628 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.83□□□□□ -1.48
CNOT4O95628 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.83□□□□□ -1.48
CNOT4O95628 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CNOT4O95628 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CNOT4O95628 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CNOT4O95628 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CNOT4O95628 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CNOT4O95628 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.83□□□□□ -1.48
CNOT4O95628 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CNOT4O95628 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CNOT4O95628 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CNOT4O95628 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CNOT4O95628 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CNOT4O95628 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.83□□□□□ -1.48
CNOT4O95628 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CNOT4O95628 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CNOT4O95628 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.82□□□□□ -1.48
CNOT4O95628 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CNOT4O95628 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.82□□□□□ -1.48
CNOT4O95628 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.82□□□□□ -1.48
CNOT4O95628 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CNOT4O95628 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.82□□□□□ -1.48
CNOT4O95628 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.82□□□□□ -1.48
CNOT4O95628 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CNOT4O95628 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.82□□□□□ -1.48
CNOT4O95628 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CNOT4O95628 RN7SKP15-201ENST00000364742 309 ntBASIC5.82□□□□□ -1.48
CNOT4O95628 RNU6-1283P-201ENST00000365314 105 ntBASIC5.82□□□□□ -1.48
CNOT4O95628 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CNOT4O95628 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CNOT4O95628 MIR142-201ENST00000384835 87 ntBASIC5.82□□□□□ -1.48
CNOT4O95628 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CNOT4O95628 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.82□□□□□ -1.48
CNOT4O95628 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.82□□□□□ -1.48
CNOT4O95628 MTND4LP17-201ENST00000414607 293 ntBASIC5.82□□□□□ -1.48
CNOT4O95628 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CNOT4O95628 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.82□□□□□ -1.48
CNOT4O95628 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.82□□□□□ -1.48
CNOT4O95628 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.82□□□□□ -1.48
CNOT4O95628 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.82□□□□□ -1.48
CNOT4O95628 FO393419.3-201ENST00000428741 282 ntBASIC5.82□□□□□ -1.48
CNOT4O95628 Z68868.1-201ENST00000429048 544 ntBASIC5.82□□□□□ -1.48
CNOT4O95628 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CNOT4O95628 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.82□□□□□ -1.48
CNOT4O95628 AL035458.1-201ENST00000433096 585 ntBASIC5.82□□□□□ -1.48
CNOT4O95628 MTCO1P52-201ENST00000433928 531 ntBASIC5.82□□□□□ -1.48
CNOT4O95628 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.82□□□□□ -1.48
CNOT4O95628 AL592437.1-201ENST00000443781 492 ntBASIC5.82□□□□□ -1.48
CNOT4O95628 AL020997.1-201ENST00000446554 349 ntBASIC5.82□□□□□ -1.48
CNOT4O95628 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms