Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC078880.5-201ENST00000617845 421 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.06□□□□□ -1.6
NKX2-2O95096 AC007342.8-201ENST00000623278 678 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 AP003476.1-201ENST00000623984 516 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 AC135068.5-201ENST00000624197 983 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-2O95096 AC083865.1-201ENST00000636634 831 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NKX2-2O95096 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-2O95096 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
NKX2-2O95096 ABCC13-202ENST00000463099 3842 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 CCT8P1-201ENST00000413611 1657 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.05□□□□□ -1.6
NKX2-2O95096 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-2O95096 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.05□□□□□ -1.6
NKX2-2O95096 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.05□□□□□ -1.6
NKX2-2O95096 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-2O95096 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-2O95096 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-2O95096 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-2O95096 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
NKX2-2O95096 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-2O95096 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-2O95096 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-2O95096 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NKX2-2O95096 RNU6-468P-201ENST00000384003 109 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 RNU6-1000P-201ENST00000391066 106 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 SNORA11.5-201ENST00000408163 128 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 RN7SKP286-201ENST00000410894 299 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 Z68694.1-201ENST00000413929 841 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 AL445183.3-201ENST00000414168 502 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-2O95096 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-2O95096 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-2O95096 RPS4XP16-201ENST00000427198 791 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-2O95096 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-2O95096 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-2O95096 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-2O95096 AL645931.1-201ENST00000439737 410 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 YWHAZP2-201ENST00000440317 728 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 AC097499.1-201ENST00000444277 208 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.05□□□□□ -1.6
NKX2-2O95096 AC044797.1-201ENST00000445744 679 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.05□□□□□ -1.6
NKX2-2O95096 AL672138.1-201ENST00000450604 1015 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.05□□□□□ -1.6
NKX2-2O95096 RN7SL273P-201ENST00000481561 299 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-2O95096 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-2O95096 AC018442.3-201ENST00000523025 183 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 AC104115.2-201ENST00000523026 687 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.05□□□□□ -1.6
NKX2-2O95096 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-2O95096 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-2O95096 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-2O95096 OR1AB1P-201ENST00000585564 761 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.05□□□□□ -1.6
NKX2-2O95096 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-2O95096 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.05□□□□□ -1.6
NKX2-2O95096 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-2O95096 AP000769.2-201ENST00000602344 396 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-2O95096 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-2O95096 RMST_10.1-201ENST00000616309 154 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NKX2-2O95096 AP001962.1-201ENST00000624114 559 ntBASIC5.05□□□□□ -1.6
NKX2-2O95096 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.05□□□□□ -1.6
NKX2-2O95096 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-2O95096 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.05□□□□□ -1.6
NKX2-2O95096 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NKX2-2O95096 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-2O95096 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NKX2-2O95096 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-2O95096 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-2O95096 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-2O95096 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NKX2-2O95096 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-2O95096 RNU6-452P-201ENST00000384406 107 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 DBIP1-201ENST00000401435 260 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
NKX2-2O95096 GPS2P1-201ENST00000411761 986 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX2-2O95096 Z93019.1-201ENST00000416450 973 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.04□□□□□ -1.6
NKX2-2O95096 OR51A6P-201ENST00000418680 1004 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 MTCO3P4-201ENST00000419236 787 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-2O95096 AC023128.2-201ENST00000420880 1223 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 AL354766.1-201ENST00000423396 542 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 HSFY1P1-201ENST00000423928 1178 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX2-2O95096 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.04□□□□□ -1.6
NKX2-2O95096 RPL5P2-201ENST00000429598 854 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX2-2O95096 PCNPP2-201ENST00000441651 455 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.04□□□□□ -1.6
NKX2-2O95096 YWHAEP1-201ENST00000453697 763 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms