Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RN7SL727P-201ENST00000482164 296 ntBASIC5.51□□□□□ -1.53
O00370 RN7SL214P-201ENST00000487317 265 ntBASIC5.51□□□□□ -1.53
O00370 NIFKP7-201ENST00000503365 834 ntBASIC5.51□□□□□ -1.53
O00370 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.51□□□□□ -1.53
O00370 RNA5SP34-201ENST00000516887 130 ntBASIC5.51□□□□□ -1.53
O00370 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.51□□□□□ -1.53
O00370 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.51□□□□□ -1.53
O00370 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.51□□□□□ -1.53
O00370 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.51□□□□□ -1.53
O00370 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
O00370 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.51□□□□□ -1.53
O00370 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
O00370 AC022884.2-201ENST00000578535 580 ntBASIC5.51□□□□□ -1.53
O00370 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.51□□□□□ -1.53
O00370 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.51□□□□□ -1.53
O00370 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.51□□□□□ -1.53
O00370 AL118556.2-201ENST00000614375 824 ntBASIC5.51□□□□□ -1.53
O00370 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.51□□□□□ -1.53
O00370 AL590763.1-201ENST00000398297 1545 ntBASIC5.51□□□□□ -1.53
O00370 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
O00370 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
O00370 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
O00370 AP001642.1-201ENST00000624727 2117 ntBASIC5.51□□□□□ -1.53
O00370 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.51□□□□□ -1.53
O00370 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
O00370 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.51□□□□□ -1.53
O00370 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.51□□□□□ -1.53
O00370 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.5□□□□□ -1.53
O00370 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
O00370 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
O00370 ZNF652P1-201ENST00000442420 1309 ntBASIC5.5□□□□□ -1.53
O00370 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
O00370 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
O00370 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
O00370 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
O00370 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.5□□□□□ -1.53
O00370 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
O00370 AL353625.1-202ENST00000366273 571 ntBASIC5.5□□□□□ -1.53
O00370 RNU6-729P-201ENST00000384399 107 ntBASIC5.5□□□□□ -1.53
O00370 MIR223-201ENST00000385204 110 ntBASIC5.5□□□□□ -1.53
O00370 PCNPP4-201ENST00000414817 517 ntBASIC5.5□□□□□ -1.53
O00370 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.5□□□□□ -1.53
O00370 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
O00370 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.5□□□□□ -1.53
O00370 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.5□□□□□ -1.53
O00370 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.5□□□□□ -1.53
O00370 RPL34P6-201ENST00000432390 345 ntBASIC5.5□□□□□ -1.53
O00370 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.5□□□□□ -1.53
O00370 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.5□□□□□ -1.53
O00370 RAD1P2-201ENST00000446414 663 ntBASIC5.5□□□□□ -1.53
O00370 NDUFA5P8-201ENST00000449019 346 ntBASIC5.5□□□□□ -1.53
O00370 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.5□□□□□ -1.53
O00370 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
O00370 AC100784.1-201ENST00000522790 310 ntBASIC5.5□□□□□ -1.53
O00370 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.5□□□□□ -1.53
O00370 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.5□□□□□ -1.53
O00370 AC004825.1-201ENST00000555068 586 ntBASIC5.5□□□□□ -1.53
O00370 SNORD39.2-201ENST00000579995 76 ntBASIC5.5□□□□□ -1.53
O00370 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.5□□□□□ -1.53
O00370 AP005432.2-201ENST00000608162 586 ntBASIC5.5□□□□□ -1.53
O00370 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.5□□□□□ -1.53
O00370 AC117490.2-201ENST00000610042 594 ntBASIC5.5□□□□□ -1.53
O00370 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.5□□□□□ -1.53
O00370 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
O00370 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
O00370 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.5□□□□□ -1.53
O00370 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
O00370 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.5□□□□□ -1.53
O00370 SMG1P7-201ENST00000565246 2704 ntBASIC5.5□□□□□ -1.53
O00370 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
O00370 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
O00370 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
O00370 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
O00370 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
O00370 TTC39DP-201ENST00000416781 1688 ntBASIC5.5□□□□□ -1.53
O00370 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
O00370 AC100778.3-201ENST00000580060 1750 ntBASIC5.5□□□□□ -1.53
O00370 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
O00370 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
O00370 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.49□□□□□ -1.53
O00370 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
O00370 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
O00370 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
O00370 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
O00370 RNA5SP223-201ENST00000365174 120 ntBASIC5.49□□□□□ -1.53
O00370 MIR600-201ENST00000385007 98 ntBASIC5.49□□□□□ -1.53
O00370 MARK2P12-201ENST00000420129 585 ntBASIC5.49□□□□□ -1.53
O00370 AC104333.2-201ENST00000422630 192 ntBASIC5.49□□□□□ -1.53
O00370 AL139148.1-201ENST00000427122 680 ntBASIC5.49□□□□□ -1.53
O00370 MTCO1P51-201ENST00000427672 1060 ntBASIC5.49□□□□□ -1.53
O00370 AC046176.1-201ENST00000435260 1170 ntBASIC5.49□□□□□ -1.53
O00370 MAPRE1P3-201ENST00000435438 796 ntBASIC5.49□□□□□ -1.53
O00370 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.49□□□□□ -1.53
O00370 CYCSP24-201ENST00000445119 316 ntBASIC5.49□□□□□ -1.53
O00370 BX842559.2-201ENST00000451418 605 ntBASIC5.49□□□□□ -1.53
O00370 HMGN1P8-201ENST00000463578 288 ntBASIC5.49□□□□□ -1.53
O00370 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
O00370 AC074386.1-201ENST00000476560 767 ntBASIC5.49□□□□□ -1.53
O00370 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
O00370 RN7SL629P-201ENST00000489622 285 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms