Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AC109780.1-201ENST00000451768 1344 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AC092451.3-201ENST00000625067 1343 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 MFSD8-213ENST00000641134 1327 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 MRRFP1-201ENST00000435941 1675 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 MSL3P1-202ENST00000440028 1468 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 RNU6-1263P-201ENST00000384601 106 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AC106883.1-201ENST00000418805 562 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 RNGTTP1-201ENST00000420965 728 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 PNRC2P1-201ENST00000423940 420 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AC092651.1-201ENST00000426110 312 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 KRT8P51-201ENST00000438938 274 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 snoU109.3-201ENST00000459477 145 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 RPS21P4-201ENST00000487122 248 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AC006499.3-201ENST00000506077 748 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 PGAM1P13-201ENST00000507497 754 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 PMS2P3-207ENST00000529061 717 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AC044860.2-201ENST00000561005 179 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AL049838.1-201ENST00000563647 981 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AC069431.2-201ENST00000604149 1099 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AC012557.1-201ENST00000607115 611 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 VN1R9P-201ENST00000614184 867 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AL512427.1-201ENST00000618593 349 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 SAMMSON-227ENST00000642114 1199 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 AC007342.7-201ENST00000624610 2337 ntBASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.54□□□□□ -1.52
TBC1D3FA6NER0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 RNU6-207P-201ENST00000384137 107 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 SNORA70-201ENST00000384436 135 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 RNU11-201ENST00000387069 134 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 ATF1P1-201ENST00000406040 927 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 AC096533.1-201ENST00000411645 353 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 AC096921.1-201ENST00000411661 375 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 DPPA2P3-201ENST00000411853 655 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 AL390774.1-201ENST00000411924 246 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 AC241520.1-201ENST00000422654 1099 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 MTCO2P23-201ENST00000425216 680 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 AL139148.1-201ENST00000427122 680 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 NANOGP4-201ENST00000427230 913 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 MTCYBP12-201ENST00000440559 1134 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 AC069540.1-201ENST00000446320 988 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 AC105399.1-202ENST00000447303 205 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 RN7SL610P-201ENST00000463845 291 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 AC104164.3-201ENST00000467363 1258 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 RPS17P11-201ENST00000474297 293 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 AC010374.1-201ENST00000503762 1237 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 UBE2V1P12-201ENST00000503954 474 ntBASIC5.53□□□□□ -1.52
TBC1D3FA6NER0 AC025459.1-201ENST00000504072 156 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms