Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 STRADBP1-201ENST00000478954 1281 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 RN7SL580P-201ENST00000492489 287 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 Z99943.2-201ENST00000507585 266 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC017037.1-201ENST00000508460 471 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC109458.1-201ENST00000508858 316 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC106774.2-201ENST00000510266 406 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 RNA5SP446-201ENST00000515955 82 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 RNA5SP206-201ENST00000516703 121 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 Y_RNA.719-201ENST00000517156 106 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 KCTD9P6-201ENST00000522306 950 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC137055.1-201ENST00000549333 395 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC010547.7-201ENST00000570323 333 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 MIR3689F-201ENST00000579617 66 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 ZRANB2-AS2-206ENST00000583678 551 ntTSL 4 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC012603.1-201ENST00000606424 528 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 RN7SL760P-201ENST00000607344 270 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AL135786.2-201ENST00000608422 615 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AL022324.3-201ENST00000609330 747 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC007204.2-201ENST00000615022 616 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 MIR6811-201ENST00000620409 58 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC127381.3-201ENST00000622901 303 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC027559.1-201ENST00000636288 271 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC006453.5-201ENST00000636451 619 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 MTCO1P14-201ENST00000441695 1559 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC114546.3-201ENST00000623582 1734 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 BX005019.1-201ENST00000561881 1810 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 SLC9B1P3-201ENST00000452667 1334 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 AC022893.2-201ENST00000564832 3296 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 PRO1804-201ENST00000623780 2050 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 CSAG4-201ENST00000361201 755 ntTSL 2 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 RGS5-202ENST00000367903 934 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 WISP3-205ENST00000409166 953 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 AC009237.5-201ENST00000414271 501 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 AC019050.1-201ENST00000418508 492 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 SNHG26-202ENST00000422542 1106 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 AL353779.2-201ENST00000424917 308 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 USP12PY-201ENST00000427677 1064 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 MTCO1P54-201ENST00000430139 712 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 PSMD10P2-201ENST00000432890 672 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 AL359265.2-201ENST00000434367 631 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 AC094019.1-201ENST00000434678 472 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 CXCR2P1-202ENST00000443392 1074 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 YWHAQP9-201ENST00000445891 512 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 AL121578.2-201ENST00000448797 447 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 AL035090.1-201ENST00000454835 332 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 AL928654.1-201ENST00000476081 354 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 AC092865.4-201ENST00000477936 615 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 RPL32P33-201ENST00000487023 394 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 RPL7P47-201ENST00000497299 556 ntBASIC2.47□□□□□ -2.01
LINC01558Q9Y6Z2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms