Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL136520.1-202ENST00000555494 763 ntBASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 MIR4660-201ENST00000583549 74 ntBASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 AP002884.5-201ENST00000595053 1132 ntBASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 AC095055.1-201ENST00000603472 1113 ntBASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 AL162431.4-201ENST00000604674 411 ntBASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 MIR6719-201ENST00000622428 87 ntBASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 SAMMSON-227ENST00000642114 1199 ntBASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 AC133552.1-201ENST00000569988 4007 ntBASIC5.64□□□□□ -1.51
SNX9Q9Y5X1 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 SNORA17.1-201ENST00000362945 126 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 MIR600-201ENST00000385007 98 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 RN7SKP126-201ENST00000411143 300 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AL512504.1-201ENST00000415494 778 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AL357078.2-201ENST00000416486 427 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 CLUHP1-201ENST00000435012 1190 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 RN7SL515P-201ENST00000463999 297 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 CBX1P5-201ENST00000475330 559 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AC022133.1-201ENST00000490961 571 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AC106806.2-201ENST00000509365 500 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 SNORA26.10-201ENST00000516427 141 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AC012400.1-201ENST00000518452 381 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AC134349.2-201ENST00000535136 910 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AC012414.2-201ENST00000559474 187 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AC006272.2-201ENST00000594725 163 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AC009597.2-201ENST00000604659 592 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AL121612.2-201ENST00000612261 482 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 AC002525.1-201ENST00000624392 1622 ntBASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SNX9Q9Y5X1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 OR9G4-201ENST00000302957 984 ntBASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 U3.3-201ENST00000362986 216 ntBASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 SPTLC1P2-201ENST00000407089 121 ntBASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 AL139039.2-201ENST00000407436 479 ntBASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 SNORA79B-201ENST00000410557 148 ntBASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 AC098592.2-201ENST00000413158 265 ntBASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 NPM1P18-201ENST00000434232 732 ntBASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 RPL31P53-201ENST00000457065 348 ntBASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 RPL7P41-201ENST00000485823 957 ntBASIC5.62□□□□□ -1.51
SNX9Q9Y5X1 SNRPCP2-201ENST00000504370 475 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms