Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 MIR7-1-201ENST00000384871 110 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 RN7SKP278-201ENST00000410504 342 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 RPL12P9-201ENST00000412942 488 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AC108075.1-201ENST00000424692 529 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 NANOGP4-201ENST00000427230 913 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AL136231.1-201ENST00000429407 730 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 ARL5AP3-201ENST00000439327 386 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 CNOT7P2-201ENST00000441051 832 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 RN7SL172P-201ENST00000460535 303 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 HIGD1AP14-201ENST00000507617 282 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 EIF3KP3-201ENST00000514461 639 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AC027216.1-201ENST00000577726 685 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 MTCYBP13-201ENST00000578634 1093 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 FAM106CP-201ENST00000582212 507 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AC245128.3-201ENST00000594721 748 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AC022387.2-201ENST00000604050 448 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AL133406.3-201ENST00000606817 541 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AC073575.2-201ENST00000614212 627 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AC015722.2-201ENST00000622210 551 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AC011493.1-201ENST00000596753 1632 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AC006210.2-201ENST00000367074 1545 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 MIR223-201ENST00000385204 110 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AC104297.1-201ENST00000393779 870 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 OR8V1P-201ENST00000395193 873 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 DHFRP5-201ENST00000406944 564 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AC093084.1-201ENST00000424233 687 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 NPM1P26-201ENST00000426339 738 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 OR52B5P-201ENST00000435337 951 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 OR52E3P-201ENST00000452083 936 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 Z92846.1-201ENST00000456203 268 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 OR9N1P-201ENST00000491296 333 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AC006499.3-201ENST00000506077 748 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AC012400.1-201ENST00000518452 381 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AC007448.1-201ENST00000582714 234 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AC091932.2-201ENST00000623014 291 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 OR52B5P-202ENST00000641118 1110 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AL138820.1-201ENST00000617901 5305 ntBASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.94□□□□□ -1.62
ATG4BQ9Y4P1 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 VPS35P1-201ENST00000563400 1518 ntBASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4BQ9Y4P1 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms