Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
VAPAQ9P0L0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
VAPAQ9P0L0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
VAPAQ9P0L0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
VAPAQ9P0L0 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VAPAQ9P0L0 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VAPAQ9P0L0 AC008549.2-201ENST00000333482 706 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
VAPAQ9P0L0 U3.2-201ENST00000362981 210 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 RNU6-673P-201ENST00000365084 104 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 BMS1P3-201ENST00000372011 932 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 SNORA70.10-201ENST00000384515 134 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 RN7SKP114-201ENST00000410327 279 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 CDY17P-201ENST00000414121 1282 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 VN1R3-201ENST00000418822 919 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 RPL24P2-201ENST00000421023 475 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 EIF4HP2-201ENST00000424380 563 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 AC108075.1-201ENST00000424692 529 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.71□□□□□ -1.66
VAPAQ9P0L0 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.71□□□□□ -1.66
VAPAQ9P0L0 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.71□□□□□ -1.66
VAPAQ9P0L0 SNRPFP2-201ENST00000440710 251 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.71□□□□□ -1.66
VAPAQ9P0L0 AC098583.1-201ENST00000480875 255 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
VAPAQ9P0L0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.71□□□□□ -1.66
VAPAQ9P0L0 AC008521.2-201ENST00000591021 259 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 AP002884.5-201ENST00000595053 1132 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VAPAQ9P0L0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.71□□□□□ -1.66
VAPAQ9P0L0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VAPAQ9P0L0 SCARNA15-201ENST00000607520 4325 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
VAPAQ9P0L0 CASC19-206ENST00000641028 1430 ntBASIC4.71□□□□□ -1.66
VAPAQ9P0L0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.71□□□□□ -1.66
VAPAQ9P0L0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VAPAQ9P0L0 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC027228.2-201ENST00000567141 2154 ntBASIC4.7□□□□□ -1.66
VAPAQ9P0L0 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AL031985.1-201ENST00000392713 418 ntBASIC4.7□□□□□ -1.66
VAPAQ9P0L0 RN7SKP293-201ENST00000411389 296 ntBASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 EIF4A1P1-201ENST00000420241 934 ntBASIC4.7□□□□□ -1.66
VAPAQ9P0L0 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 RPL7L1P9-201ENST00000431298 745 ntBASIC4.7□□□□□ -1.66
VAPAQ9P0L0 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 RN7SL517P-201ENST00000462240 305 ntBASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC112206.1-201ENST00000468416 477 ntBASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC010350.1-201ENST00000504908 231 ntBASIC4.7□□□□□ -1.66
VAPAQ9P0L0 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC026688.1-201ENST00000520639 1168 ntBASIC4.7□□□□□ -1.66
VAPAQ9P0L0 OR4A46P-201ENST00000527255 933 ntBASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 RNF138P2-201ENST00000603490 592 ntBASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AL589674.2-201ENST00000604304 337 ntBASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC126175.1-201ENST00000617041 758 ntBASIC4.7□□□□□ -1.66
VAPAQ9P0L0 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC000123.3-201ENST00000624029 4975 ntBASIC4.7□□□□□ -1.66
VAPAQ9P0L0 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VAPAQ9P0L0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 MIR137-201ENST00000385223 102 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AP000580.1-201ENST00000404439 358 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 SNORA81-201ENST00000408493 178 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 PTP4A1P1-201ENST00000420539 515 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 RGS17P1-201ENST00000423358 553 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AC092447.2-201ENST00000435487 669 ntBASIC4.69□□□□□ -1.66
VAPAQ9P0L0 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms